Photo-isolation chemistry for high-resolution and deep spatial transcriptome with mouse tissue sections-Reference-Cited by-同舟云学术

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Photo-isolation chemistry for high-resolution and deep spatial transcriptome with mouse tissue sections

Published:2022-06 Issue:2 Volume:3 Page:101346
ISSN:2666-1667
Container-title:STAR Protocols
language:en
Short-container-title:STAR Protocols

Author:

Honda Mizuki,Kimura Ryuichi,Harada Akihito,Maehara Kazumitsu,Tanaka Kaori,Ohkawa Yasuyuki,Oki Shinya

Publisher

Elsevier BV

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Neuroscience

Reference9 articles.

1. Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons;Cembrowski;Elife,2016

2. CEL-seq2: sensitive highly-multiplexed single-cell RNA-Seq;Hashimshony;Genome Biol.,2016

3. High-depth spatial transcriptome analysis by photo-isolation chemistry;Honda;Nat. Commun.,2021

4. Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype;Kim;Nat. Biotechnol.,2019

5. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2;Love;Genome Biol.,2014

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1. Biallelic null variants in PNPLA8 cause microcephaly by reducing the number of basal radial glia;Brain;2024-07-31

2. Atf3 controls transitioning in female mitochondrial cardiomyopathy as identified by single-cell transcriptomics;2023-09-11

3. Biallelic null variants inPNPLA8cause microcephaly through the reduced abundance of basal radial glia;2023-04-29

4. Spatially Resolved High-depth Transcriptome Analysis by Photo-Isolation Chemistry;Seibutsu Butsuri;2022

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