Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
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Publisher
Springer Science and Business Media LLC
Link
http://link.springer.com/content/pdf/10.1186/s13059-014-0550-8.pdf
Reference66 articles.
1. Lönnstedt I, Speed T: Replicated microarray data . Stat Sinica. 2002, 12: 31-46.
2. Robinson MD, Smyth GK: Moderated statistical tests for assessing differences in tag abundance . Bioinformatics. 2007, 23: 2881-2887. 10.1093/bioinformatics/btm453.
3. McCarthy DJ, Chen Y, Smyth GK: Differential expression analysis of multifactor RNA-seq experiments with respect to biological variation . Nucleic Acids Res. 2012, 40: 4288-4297. 10.1093/nar/gks042.
4. Anders S, Huber W: Differential expression analysis for sequence count data . Genome Biol. 2010, 11: 106-10.1186/gb-2010-11-10-r106.
5. Zhou Y-H, Xia K, Wright FA: A powerful and flexible approach to the analysis of RNA sequence count data . Bioinformatics. 2011, 27: 2672-2678. 10.1093/bioinformatics/btr449.
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