DeF-GPU: Efficient and effective deletions finding in hepatitis B viral genomic DNA using a GPU architecture-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

DeF-GPU: Efficient and effective deletions finding in hepatitis B viral genomic DNA using a GPU architecture

Published:2016-12 Issue: Volume:111 Page:56-63
ISSN:1046-2023
Container-title:Methods
language:en
Short-container-title:Methods

Author:

Cheng Chun-Pei,Lan Kuo-Lun,Liu Wen-Chun,Chang Ting-Tsung,Tseng Vincent S.

Funder

Ministry of Science and Technology, Taiwan

Publisher

Elsevier BV

Subject

General Biochemistry, Genetics and Molecular Biology,Molecular Biology

Reference25 articles.

1. The sequence alignment/map format and SAM tools;Li;Bioinformatics,2009

2. A framework for variation discovery and genotyping using next-generation DNA sequencing data;DePristo;Nat. Genet.,2011

3. Fast and accurate short read alignment with Burrows-Wheeler transform;Li;Bioinformatics,2009

4. Fast gapped-read alignment with Bowtie 2;Langmead;Nat. Methods,2012

5. SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner;Luo;PLoS ONE,2013

Cited by 4 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. JACC-FPGA: A hardware accelerator for Jaccard similarity estimation using FPGAs in the cloud;Future Generation Computer Systems;2023-01

2. Applications of next-generation sequencing analysis for the detection of hepatocellular carcinoma-associated hepatitis B virus mutations;Journal of Biomedical Science;2018-06-02

3. Detecting exact breakpoints of deletions with diversity in hepatitis B viral genomic DNA from next-generation sequencing data;Methods;2017-10

4. Big Data Bioinformatics;Methods;2016-12

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP