Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes-Reference-Cited by-同舟云学术

Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes

Published:2019-08 Issue:5 Volume:178 Page:1245-1259.e14
ISSN:0092-8674
Container-title:Cell
language:en
Short-container-title:Cell

Author:

Sberro Hila,Fremin Brayon J.,Zlitni Soumaya,Edfors Fredrik,Greenfield Nicholas,Snyder Michael P.,Pavlopoulos Georgios A.,Kyrpides Nikos C.,Bhatt Ami S.

Funder

Damon Runyon Cancer Research Foundation

Pharmaceutical Research and Manufacturers of America Foundation

U.S. Department of Energy

National Institutes of Health

Publisher

Elsevier BV

Subject

General Biochemistry, Genetics and Molecular Biology

Reference93 articles.

1. Metatranscriptome of human faecal microbial communities in a cohort of adult men;Abu-Ali;Nat. Microbiol.,2018

2. Genetic variation in comC, the gene encoding competence-stimulating peptide (CSP) in Streptococcus mutans;Allan;FEMS Microbiol. Lett.,2007

3. SignalP 5.0 improves signal peptide predictions using deep neural networks;Almagro Armenteros;Nat. Biotechnol.,2019

4. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs;Altschul;Nucleic Acids Res.,1997

5. AmPEP: Sequence-based prediction of antimicrobial peptides using distribution patterns of amino acid properties and random forest;Bhadra;Sci. Rep.,2018

Cited by 178 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. A catalog of small proteins from the global microbiome;Nature Communications;2024-08-31

2. Dual quorum-sensing control of purine biosynthesis drives pathogenic fitness ofEnterococcus faecalis;2024-08-13

3. PSPI: A deep learning approach for prokaryotic small protein identification;Frontiers in Genetics;2024-07-10

4. Assessing fecal metaproteomics workflow and small protein recovery using DDA and DIA PASEF mass spectrometry;Microbiome Research Reports;2024-07-03

5. Discovery of antimicrobial peptides in the global microbiome with machine learning;Cell;2024-07