A new graphical coding of DNA sequence and its similarity calculation

Author:

Liao Bo,Xiang Qilin,Cai Lijun,Cao Zhi

Funder

Program for New Century Excellent Talents in University

National Nature Science Foundation of China

National Nature Science Foundation of Hunan province

Planned Science and Technology Project of Hunan Province

Fundamental Research Funds for the Central Universities, Hunan university

Publisher

Elsevier BV

Subject

Condensed Matter Physics,Statistics and Probability

Reference39 articles.

1. Multiple alignment of DNA sequences with MAFFT;Katoh;Methods in Molecular Biology,2009

2. Insights from the comparison of plant genome sequences;Paterson;Annual Review of Plant Biology,2010

3. 3D-dynamic representation of DNA sequences;Aram;MATCH Communications in Mathematical and in Computer Chemistry,2012

4. Computing the Schul tz molecular topological index of some graphs;Baba;Optoelectronics and Advanced Materials-Rapid Communications,2010

5. Graphical and numerical representations of DNA sequences: statistical aspects of similarity;Bielinska-Waz;Journal of Computational Chemistry,2011

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1. Protein Sequence Comparison Method Based on 3-ary Huffman Coding;Match Communications in Mathematical and in Computer Chemistry;2023-04

2. Biochemical Property Based Positional Matrix: A New Approach Towards Genome Sequence Comparison;Journal of Molecular Evolution;2022-12-31

3. A Topological Characterization of DNA Sequences Based on Chaos Geometry and Persistent Homology;2022 International Conference on Computational Science and Computational Intelligence (CSCI);2022-12

4. Novel Protein Sequence Comparison Method Based on Transition Probability Graph and Information Entropy;Combinatorial Chemistry & High Throughput Screening;2022-03

5. A new feature vector model for alignment-free DNA sequence similarity analysis;Sigma Journal of Engineering and Natural Sciences – Sigma Mühendislik ve Fen Bilimleri Dergisi;2022

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