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Computational study of protein secondary structure elements: Ramachandran plots revisited

  • Published:2014-05 Issue: Volume:50 Page:125-133
  • ISSN:1093-3263
  • Container-title:Journal of Molecular Graphics and Modelling
  • language:en
  • Short-container-title:Journal of Molecular Graphics and Modelling

Author:

Carrascoza Francisco,Zaric Snezana,Silaghi-Dumitrescu Radu

Publisher

Elsevier BV

Subject

Materials Chemistry,Computer Graphics and Computer-Aided Design,Physical and Theoretical Chemistry,Spectroscopy

Reference29 articles.

1. Stereochemical criteria for polypeptide and protein chain conformations: II. Allowed conformations for a pair of peptide units;Ramakrishnan;Biophys. J.,1965

2. Structure validation by Calpha geometry: phi, psi and Cbeta deviation;Lovell;Proteins,2003

3. Objectively judging the quality of a protein structure from a Ramachandran plot;Hooft;Comput. Appl. Biosci.,1997

4. Stereochemistry of polypeptide chain configurations;Ramachandran;J. Mol. Biol.,1963

5. Databases in protein crystallography;Kleywegt;Acta Crystallogr. D: Biol. Crystallogr.,1998
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