In Silico Restriction Enzyme Digests to Minimize Mapping Bias in Genomic Sequencing-Reference-Cited by-同舟云学术

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In Silico Restriction Enzyme Digests to Minimize Mapping Bias in Genomic Sequencing

Published:2017-09 Issue: Volume:6 Page:66-67
ISSN:2329-0501
Container-title:Molecular Therapy - Methods & Clinical Development
language:en
Short-container-title:Molecular Therapy - Methods & Clinical Development

Author:

Roszik Jason,Fenyőfalvi György,Halász László,Karányi Zsolt,Székvölgyi Lóránt

Funder

Hungarian Academy of Sciences

Lendület programme

National Research, Development and Innovation Office

Publisher

Elsevier BV

Subject

Genetics,Molecular Biology,Molecular Medicine

Reference9 articles.

1. R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters;Ginno;Mol. Cell,2012

2. RNA-DNA hybrid (R-loop) immunoprecipitation mapping: an analytical workflow to evaluate inherent biases;Halász;Genome Res.,2017

3. Comprehensive mapping of long-range interactions reveals folding principles of the human genome;Lieberman-Aiden;Science,2009

4. Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis;Meissner;Nucleic Acids Res.,2005

5. Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers;Miller;Genome Res.,2007

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1. Evaluating restriction enzyme selection for reduced representation sequencing in conservation genomics;Molecular Ecology Resources;2023-09-14

2. Evaluating restriction enzyme selection for genome reduction in conservation genomics;2022-11-27

3. In silico restriction site analysis for characterization of Toxoplasma gondii isolate;IOP Conference Series: Earth and Environmental Science;2022-02-01

4. Restriction fragment length polymorphism analysis of genes of virulent strain isolate of Toxoplasma gondii using enzyme DdeI;International Journal of One Health;2021-10-13

5. Restriction site-associated DNA from Python-implemented Digestion Simulations (RApyDS): a companion tool for RAD sequencing experimental design;F1000Research;2021-05-07

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