A Monte Carlo method for in silico modeling and visualization of Waddington’s epigenetic landscape with intermediate details

Author:

Zhang Xiaomeng,Chong Ket Hing,Zhu Lin,Zheng Jie

Funder

MOE AcRF Tier 1

MOE AcRF Tier 2

Ministry of Education Singapore

ShanghaiTech University, Shanghai, China

Publisher

Elsevier BV

Subject

Applied Mathematics,General Biochemistry, Genetics and Molecular Biology,Modelling and Simulation,General Medicine,Statistics and Probability

Reference40 articles.

1. Effects of collective histone state dynamics on epigenetic landscape and kinetics of cell reprogramming;Ashwin;Sci. Rep.,2015

2. A deterministic map of waddington’s epigenetic landscape for cell fate specification;Bhattacharya;BMC Syst. Biol.,2011

3. Computational techniques in mathematical modelling of biological switches;Chong,2015

4. Methods for characterizing the epigenetic attractors landscape associated with boolean gene regulatory networks;Davila-Velderrain,2015

5. Modeling the epigenetic attractors landscape: toward a post-genomic mechanistic understanding of development;Davila-Velderrain;Front. Genet.,2015

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