Optimizing Strategy for Whole-Genome Genotype Imputation in Scallops-Reference-Cited by-同舟云学术

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Optimizing Strategy for Whole-Genome Genotype Imputation in Scallops

Published:2025-01 Issue: Volume:595 Page:741492
ISSN:0044-8486
Container-title:Aquaculture
language:en
Short-container-title:Aquaculture

Author:

Wang Yujue,Yao Ruixing,Zhao Liang,Zhang Qianqian,Li Moli,Kong Xiangfu,Liu Pingping,Huang Shanhuan,Hu Chen,Bao Zhenmin,Hu Xiaoli

Funder

National Key Research and Development Program of China

National Natural Science Foundation of China

Key Technology Research and Development Program of Shandong Province

Liaoning Academy of Agricultural Sciences

Publisher

Elsevier BV

Reference56 articles.

1. Trimmomatic: a flexible trimmer for Illumina sequence data;Bolger;Bioinformatics,2014

2. Estimation of pairwise identity by descent from dense genetic marker data in a population sample of haplotypes;Browning;Genetics,2008

3. Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering;Browning;Am. J. Hum. Genet.,2007

4. A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals;Browning;Am. J. Hum. Genet.,2009

5. A one-penny imputed genome from next-generation reference panels;Browning;Am. J. Hum. Genet.,2018

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