DeepBend: An interpretable model of DNA bendability
Author:
Publisher
Elsevier BV
Subject
Multidisciplinary
Reference35 articles.
1. Making the bend: DNA tertiary structure and protein-DNA interactions;Harteis;Int. J. Mol. Sci.,2014
2. Flexibility and rigidity index for chromosome packing, flexibility and dynamics analysis;Peng;Front. Comput. Sci.,2021
3. DNA bends the knee to transcription factors;Vámosi;Biophys. J.,2018
4. Measuring DNA mechanics on the genome scale;Basu;Nature,2021
5. Deciphering the mechanical code of the genome and epigenome;Basu;Nat. Struct. Mol. Biol.,2022
Cited by 6 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. Employing bimodal representations to predict DNA bendability within a self-supervised pre-trained framework;Nucleic Acids Research;2024-02-20
2. Predicting DNA structure using a deep learning method;Nature Communications;2024-02-09
3. Deep DNAshape: Predicting DNA shape considering extended flanking regions using a deep learning method;2023-10-24
4. Predictions of DNA mechanical properties at a genomic scale reveal potentially new functional roles of DNA flexibility;NAR Genomics and Bioinformatics;2023-10-11
5. Assessing base-resolution DNA mechanics on the genome scale;Nucleic Acids Research;2023-09-11
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