Tumor Phylogeny Topology Inference via Deep Learning

Author:

Sadeqi Azer Erfan,Haghir Ebrahimabadi Mohammad,Malikić Salem,Khardon Roni,Sahinalp S. Cenk

Funder

NSF

Publisher

Elsevier BV

Subject

Multidisciplinary

Reference50 articles.

1. Bello, I., Pham, H., Le, Q.V., Norouzi, M. and Bengio, S. (2017), ‘Neural combinatorial optimization with reinforcement learning’, Workshop paper in International Conference on Learning Representations, ICLR .

2. Pattern Recognition and Machine Learning;Bishop,2006

3. Does relaxing the infinite sites assumption give better tumor phylogenies? an ilp-based comparative approach;Bonizzoni;IEEE/ACM Trans. Comput. Biol. Bioinformatics,2018

4. Minimum-flip supertrees: complexity and algorithms;Chen;IEEE/ACM Trans. Comput. Biol. Bioinform.,2006

5. Ciccolella, S., Gomez, M.S., Patterson, M., Vedova, G.D., Hajirasouliha, I. and Bonizzoni, P. (2018), Gpps: an ilp-based approach for inferring cancer progression with mutation losses from single cell data, in ‘2018 IEEE 8th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS)’, pp. 1–1.

Cited by 13 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Resolving tumor evolution: a phylogenetic approach;Journal of the National Cancer Center;2024-06

2. Can convolutional neural networks approximate the phylogenetic tree of human populations with face images?1;Journal of Intelligent & Fuzzy Systems;2024-04-25

3. Biomedical Applications: The Need for Multi-Omics;Methodologies of Multi-Omics Data Integration and Data Mining;2023

4. MoTERNN: Classifying the Mode of Cancer Evolution Using Recursive Neural Networks;Comparative Genomics;2023

5. Fast intratumor heterogeneity inference from single-cell sequencing data;Nature Computational Science;2022-09-08

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3