Tepidiforma bonchosmolovskayae gen. nov., sp. nov., a moderately thermophilic Chloroflexi bacterium from a Chukotka hot spring (Arctic, Russia), representing a novel class, Tepidiformia, which includes the previously uncultivated lineage OLB14

Author:

Kochetkova Tatiana V.1,Zayulina Kseniya S.1,Zhigarkov Vyacheslav S.2,Minaev Nikita V.2ORCID,Chichkov Boris N.2,Novikov Andrei A.3ORCID,Toshchakov Stepan V.1ORCID,Elcheninov Alexander G.1,Kublanov Ilya V.1

Affiliation:

1. Winogradsky Institute of Microbiology of Federal Research Centre “Fundamentals of Biotechnology” of the Russian Academy of Sciences, Moscow, 60-let Oktyabrya prospect 7/2, Russia

2. Institute of Photon Technologies of Federal Scientific Research Centre “Crystallography and Photonics” of the Russian Academy of Sciences, Moscow, Troitsk, Pionerskaya, Russia

3. Gubkin University, Moscow, Leninsky Prospect 65-1, Russia

Abstract

A novel aerobic moderately thermophilic bacterium, strain 3753OT, was isolated from a Chukotka hot spring (Arctic, Russia) using the newly developed technology of laser engineering of microbial systems. Сells were regular short rods, 0.4×0.8–2.0 µm in size, with a monoderm-type envelope and a single flagellum. The temperature and pH ranges for growth were 42–60 °C and pH 6.5–8.5, the optima being 50–54 °C and pH 7.3. Strain 3753OT grew chemoorganoheterotrophically on a number of carbohydrates or peptidic substrates and volatile fatty acids, and chemolithoautotrophically with siderite (FeCO3) as the electron donor. The major cellular fatty acid was branched C19 : 0. Phosphatidylethanolamine, phosphatidylglycerol and two unidentified phospholipids as well as two yellow carotenoid-type pigments were detected in the polar lipid extract. Strain 3753OT was inhibited by chloramphenicol, polymyxin B, vancomycin, streptomycin, neomycin and kanamycin, but resistant to the action of novobiocin and ampicillin. The DNA G+C content was 69.9 mol%. The 16S rRNA gene as well as 51 conservative protein sequence-based phylogenetic analyses placed strain 3753OT within the previously uncultivated lineage OLB14 in the phylum Chloroflexi . Taking into account the phylogenetic position as well as phenotypic properties of the novel isolate, the novel genus and species Tepidiforma bonchosmolovskayae gen. nov., sp. nov., within the Tepidiformaceae fam. nov., the Tepidiformales ord. nov. and the Tepidiformia classis nov. are proposed. The type strain of Tepidiforma bonchosmolovskayae is 3753OT (=VKM B-3389T=KTCT 72284T).

Funder

Russian Foundation for Basic Research

Ministry of Science and Higher Education within the State assignment FRC “Fundamentals of Biotechnology” RAS

Scholarship of the President of the Russian Federation

the President of Russia

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

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