549. Bioinformatics workflow for the detection of eQTL in the cattle genome using Nextflow DSL2-Reference-Cited by-同舟云学术

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549. Bioinformatics workflow for the detection of eQTL in the cattle genome using Nextflow DSL2

Published:2022-12-31 Issue: Volume: Page:
ISSN:
Container-title:Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP)
language:
Short-container-title:

Author:

Chitneedi P.K.¹,Hadlich F.¹,Kuehn C.¹²

Affiliation:

1. Research Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196 Dummerstorf, Germany.

2. Agricultural and Environmental Faculty, University Rostock, Justus-von-Liebig-Weg 6, 18059 Rostock, Germany.

Publisher

Wageningen Academic Publishers

Link

https://www.wageningenacademic.com/doi/pdf/10.3920/978-90-8686-940-4_549

Reference17 articles.

1. Anonymous (2020) Available online at https://docs.anaconda.com/

2. Trimmomatic: a flexible trimmer for Illumina sequence data

3. RegTools: Integrated analysis of genomic and transcriptomic data for the discovery of splicing variants in cancer

4. A complete tool set for molecular QTL discovery and analysis

5. Nextflow enables reproducible computational workflows

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