Response to Comment on “A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands”-Reference-Cited by-同舟云学术

Response to Comment on “A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands”

Published:2019-08-02 Issue:38 Volume:4 Page:
ISSN:2470-9468
Container-title:Science Immunology
language:en
Short-container-title:Sci. Immunol.

Author:

Faridi Pouya¹^ORCID,Li Chen¹²^ORCID,Ramarathinam Sri H.¹^ORCID,Illing Patricia T.¹^ORCID,Mifsud Nicole A.¹^ORCID,Ayala Rochelle¹^ORCID,Song Jiangning¹³^ORCID,Gearing Linden J.⁴^ORCID,Croft Nathan P.¹^ORCID,Purcell Anthony W.¹^ORCID

Affiliation:

1. Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria 3800, Australia.

2. Department of Biology, Institute of Molecular Systems Biology, ETH-Zürich, Zürich 8093, Switzerland.

3. Centre for Data Science, Faculty of Information Technology, Monash University, Melbourne, Victoria 3800, Australia.

4. Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research and Department of Molecular and Translational Science, School of Clinical Science, Monash University, Clayton, Victoria 3168, Australia.

Abstract

This is our response to the Technical Comment by Rolfs et al. where we point out errors in their reanalysis of our data.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

General Medicine,Immunology

Reference10 articles.

1. A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands

2. A large fraction of HLA class I ligands are proteasome-generated spliced peptides

3. Predicting Peptide Retention Times for Proteomics

4. In Immunopeptidomics We Need a Sniper Instead of a Shotgun

5. Target-Decoy Search Strategy for Mass Spectrometry-Based Proteomics

Cited by 23 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. The biogenesis of the immunopeptidome;Seminars in Immunology;2023-05

2. Large-Scale Immunopeptidome Analysis Reveals Recurrent Posttranslational Splicing of Cancer- and Immune-Associated Genes;Molecular & Cellular Proteomics;2023-04

3. Using mass spectrometry to identify neoantigens in autoimmune diseases: The type 1 diabetes example;Seminars in Immunology;2023-03

4. Identification of Alternative Splicing in Proteomes of Human Melanoma Cell Lines without RNA Sequencing Data;International Journal of Molecular Sciences;2023-01-27

5. Cancer Antigens: Sources, Generation, and Presentation;Handbook of Cancer and Immunology;2023