Convergent evolution of plant prickles by repeated gene co-option over deep time-Reference-Cited by-同舟云学术

Convergent evolution of plant prickles by repeated gene co-option over deep time

Published:2024-08-02 Issue:6708 Volume:385 Page:
ISSN:0036-8075
Container-title:Science
language:en
Short-container-title:Science

Author:

Satterlee James W.¹²^ORCID,Alonso David³^ORCID,Gramazio Pietro³^ORCID,Jenike Katharine M.⁴⁵^ORCID,He Jia¹²^ORCID,Arrones Andrea³^ORCID,Villanueva Gloria³^ORCID,Plazas Mariola³^ORCID,Ramakrishnan Srividya⁴⁵,Benoit Matthias⁶^ORCID,Gentile Iacopo⁷,Hendelman Anat¹²^ORCID,Shohat Hagai¹^ORCID,Fitzgerald Blaine¹²^ORCID,Robitaille Gina M.¹²^ORCID,Green Yumi⁸,Swartwood Kerry⁸^ORCID,Passalacqua Michael J.⁷^ORCID,Gagnon Edeline⁹¹⁰^ORCID,Hilgenhof Rebecca¹⁰^ORCID,Huggins Trevis D.¹¹^ORCID,Eizenga Georgia C.¹¹^ORCID,Gur Amit¹²^ORCID,Rutten Twan¹³^ORCID,Stein Nils¹³¹⁴^ORCID,Yao Shengrui¹⁵¹⁶,Poncet Adrien¹⁷,Bellot Clement¹⁷^ORCID,Frary Amy¹⁸^ORCID,Knapp Sandra¹⁹^ORCID,Bendahmane Mohammed¹⁷^ORCID,Särkinen Tiina¹⁰^ORCID,Gillis Jesse¹²⁰^ORCID,Van Eck Joyce⁸²¹^ORCID,Schatz Michael C.⁴⁵^ORCID,Eshed Yuval²²^ORCID,Prohens Jaime³^ORCID,Vilanova Santiago³^ORCID,Lippman Zachary B.¹²⁷^ORCID

Affiliation:

1. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

2. Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

3. Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Valencia, Spain.

4. Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.

5. Department of Genetic Medicine, Johns Hopkins University, Baltimore, MD, USA.

6. French National Institute for Agriculture, Food, and Environment, Laboratory of Plant-Microbe Interactions, Toulouse, France.

7. School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

8. Boyce Thompson Institute, Ithaca, NY, USA.

9. Department of Integrative Biology, University of Guelph, Guelph, ON, Canada.

10. Royal Botanic Garden Edinburgh, Edinburgh, UK.

11. USDA-ARS, Dale Bumpers National Rice Research Center, Stuttgart, AR, USA.

12. Cucurbits Section, Department of Vegetable Sciences, Agricultural Research Organization, Newe Ya’ar Research Center, Ramat Yishay, Israel.

13. Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.

14. Crop Plant Genetics, Martin Luther University of Halle-Wittenberg, Halle (Saale), Germany.

15. Department of Plant and Environmental Sciences, New Mexico State University, Las Cruces, NM, USA.

16. Sustainable Agriculture Sciences Center, New Mexico State University, Alcalde, NM, USA.

17. Laboratoire Reproduction et Developpement des Plantes, INRAE, CNRS, Universite Lyon, Ecole Normale Superieure de Lyon, Lyon, France.

18. Department of Biological Sciences, Mount Holyoke College, South Hadley, MA, USA.

19. Natural History Museum, London, UK.

20. Physiology Department and Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada.

21. Plant Breeding and Genetics Section, Cornell University, Ithaca, NY, USA.

22. Department of Plant and Environmental Sciences, The Weizmann Institute of Science, Rehovot, Israel.

Abstract

An enduring question in evolutionary biology concerns the degree to which episodes of convergent trait evolution depend on the same genetic programs, particularly over long timescales. In this work, we genetically dissected repeated origins and losses of prickles—sharp epidermal projections—that convergently evolved in numerous plant lineages. Mutations in a cytokinin hormone biosynthetic gene caused at least 16 independent losses of prickles in eggplants and wild relatives in the genus Solanum . Homologs underlie prickle formation across angiosperms that collectively diverged more than 150 million years ago, including rice and roses. By developing new Solanum genetic systems, we leveraged this discovery to eliminate prickles in a wild species and an indigenously foraged berry. Our findings implicate a shared hormone activation genetic program underlying evolutionarily widespread and recurrent instances of plant morphological innovation.

Publisher

American Association for the Advancement of Science (AAAS)

Link

https://www.science.org/doi/pdf/10.1126/science.ado1663

Reference97 articles.

1. Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

2. Parallel adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles

3. Divergence time shapes gene reuse during repeated adaptation

4. Convergence and parallelism reconsidered: what have we learned about the genetics of adaptation?

5. Lifemap: Exploring the Entire Tree of Life

Cited by 1 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Convergent evolution of prickles across crops;Nature Reviews Genetics;2024-08-22