Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome-Reference-Cited by-同舟云学术

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

Published:2014-08-22 Issue:6199 Volume:345 Page:950-953
ISSN:0036-8075
Container-title:Science
language:en
Short-container-title:Science

Author:

Chalhoub Boulos¹,Denoeud France²³⁴,Liu Shengyi⁵,Parkin Isobel A. P.⁶,Tang Haibao⁷⁸,Wang Xiyin⁹¹⁰,Chiquet Julien¹¹,Belcram Harry¹,Tong Chaobo⁵,Samans Birgit¹²,Corréa Margot²,Da Silva Corinne²,Just Jérémy¹,Falentin Cyril¹³,Koh Chu Shin¹⁴,Le Clainche Isabelle¹,Bernard Maria²,Bento Pascal²,Noel Benjamin²,Labadie Karine²,Alberti Adriana²,Charles Mathieu¹⁵,Arnaud Dominique¹,Guo Hui⁹,Daviaud Christian¹⁶,Alamery Salman¹⁷,Jabbari Kamel¹¹⁸,Zhao Meixia¹⁹,Edger Patrick P.²⁰,Chelaifa Houda¹,Tack David²¹,Lassalle Gilles¹³,Mestiri Imen¹,Schnel Nicolas¹³,Le Paslier Marie-Christine¹⁵,Fan Guangyi²²,Renault Victor²³,Bayer Philipp E.¹⁷,Golicz Agnieszka A.¹⁷,Manoli Sahana¹⁷,Lee Tae-Ho⁹,Thi Vinh Ha Dinh¹,Chalabi Smahane¹,Hu Qiong⁵,Fan Chuchuan²⁴,Tollenaere Reece¹⁷,Lu Yunhai¹,Battail Christophe²,Shen Jinxiong²⁴,Sidebottom Christine H. D.¹⁴,Wang Xinfa⁵,Canaguier Aurélie¹,Chauveau Aurélie¹⁵,Bérard Aurélie¹⁵,Deniot Gwenaëlle¹³,Guan Mei²⁵,Liu Zhongsong²⁵,Sun Fengming²²,Lim Yong Pyo²⁶,Lyons Eric²⁷,Town Christopher D.⁷,Bancroft Ian²⁸,Wang Xiaowu²⁹,Meng Jinling²⁴,Ma Jianxin¹⁹,Pires J. Chris³⁰,King Graham J.³¹,Brunel Dominique¹⁵,Delourme Régine¹³,Renard Michel¹³,Aury Jean-Marc²,Adams Keith L.²¹,Batley Jacqueline¹⁷³²,Snowdon Rod J.¹²,Tost Jorg¹⁶,Edwards David¹⁷³²,Zhou Yongming²⁴,Hua Wei⁵,Sharpe Andrew G.¹⁴,Paterson Andrew H.⁹,Guan Chunyun²⁵,Wincker Patrick²³⁴

Affiliation:

1. Institut National de Recherche Agronomique (INRA)/Université d’Evry Val d’Essone, Unité de Recherche en Génomique Végétale, UMR1165, Organization and Evolution of Plant Genomes, 2 rue Gaston Crémieux, 91057 Evry, France.

2. Commissariat à l’Energie Atomique (CEA), Institut de Génomique (IG), Genoscope, BP5706, 91057 Evry, France.

3. Université d’Evry Val d’Essone, UMR 8030, CP5706, Evry, France.

4. Centre National de Recherche Scientifique (CNRS), UMR 8030, CP5706, Evry, France.

5. Key Laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture of People’s Republic of China, Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Wuhan 430062, China.

6. Agriculture and Agri-Food Canada, 107 Science Place, Saskatoon, SK S7N 0X2, Canada.

7. J. Craig Venter Institute, Rockville, MD 20850, USA.

8. Center for Genomics and Biotechnology, Fujian Agriculture and Forestry, University, Fuzhou 350002, Fujian Province, China.

9. Plant Genome Mapping Laboratory, University of Georgia, Athens, GA 30602, USA.

10. Center of Genomics and Computational Biology, School of Life Sciences, Hebei United University, Tangshan, Hebei 063000, China.

11. Laboratoire de Mathématiques et Modélisation d'Evry–UMR 8071 CNRS/Université d’Evry val d’Essonne–USC INRA, Evry, France.

12. Department of Plant Breeding, Research Center for Biosystems, Land Use and Nutrition, Justus Liebig University, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany.

13. INRA, Institut de Génétique, Environnement et Protection des Plantes (IGEPP) UMR1349, BP35327, 35653 Le Rheu Cedex, France.

14. National Research Council Canada, 110 Gymnasium Place, Saskatoon, SK S7N 0W9, Canada.

15. INRA, Etude du Polymorphisme des Génomes Végétaux, US1279, Centre National de Génotypage, CEA–IG, 2 rue Gaston Crémieux, 91057 Evry, France.

16. Laboratory for Epigenetics and Environment, Centre National de Génotypage, CEA–IG, 2 rue Gaston Crémieux, 91000 Evry, France.

17. Australian Centre for Plant Functional Genomics, School of Agriculture and Food Sciences, University of Queensland, St. Lucia, QLD 4072, Australia.

18. Cologne Center for Genomics, University of Cologne, Weyertal 115b, 50931 Köln, Germany.

19. Department of Agronomy, Purdue University, WSLR Building B018, West Lafayette, IN 47907, USA.

20. Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.

21. Department of Botany, University of British Columbia, Vancouver, BC, Canada.

22. Beijing Genome Institute–Shenzhen, Shenzhen 518083, China.

23. Fondation Jean Dausset–Centre d’Étude du Polymorphisme Humain, 27 rue Juliette Dodu, 75010 Paris, France.

24. National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.

25. College of Agronomy, Hunan Agricultural University, Changsha 410128, China.

26. Molecular Genetics and Genomics Laboratory, Department of Horticulture, Chungnam National University, Daejeon-305764, South Korea.

27. School of Plant Sciences, iPlant Collaborative, University of Arizona, Tucson, AZ, USA.

28. Department of Biology, University of York, Wentworth Way, Heslington, York YO10 5DD, UK.

29. Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China.

30. Division of Biological Sciences, University of Missouri, Columbia, MO 65211, USA.

31. Southern Cross Plant Science, Southern Cross University, Lismore, NSW 2480, Australia.

32. School of Plant Biology, University of Western Australia, WA 6009, Australia.

Abstract

The genomic origins of rape oilseed Many domesticated plants arose through the meeting of multiple genomes through hybridization and genome doubling, known as polyploidy. Chalhoub et al. sequenced the polyploid genome of Brassica napus , which originated from a recent combination of two distinct genomes approximately 7500 years ago and gave rise to the crops of rape oilseed (canola), kale, and rutabaga. B. napus has undergone multiple events affecting differently sized genetic regions where a gene from one progenitor species has been converted to the copy from a second progenitor species. Some of these gene conversion events appear to have been selected by humans as part of the process of domestication and crop improvement. Science , this issue p. 950

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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