Chromosome 2 Sequence of the Human Malaria Parasite Plasmodium falciparum

Author:

Gardner Malcolm J.1,Tettelin Hervé1,Carucci Daniel J.1,Cummings Leda M.1,Aravind L.1,Koonin Eugene V.1,Shallom Shamira1,Mason Tanya1,Yu Kelly1,Fujii Claire1,Pederson James1,Shen Kun1,Jing Junping1,Aston Christopher1,Lai Zhongwu1,Schwartz David C.1,Pertea Mihaela1,Salzberg Steven1,Zhou Lixin1,Sutton Granger G.1,Clayton Rebecca1,White Owen1,Smith Hamilton O.1,Fraser Claire M.1,Adams Mark D.1,Venter J. Craig1,Hoffman Stephen L.1

Affiliation:

1. M. J. Gardner, H. Tettelin, L. M. Cummings, S. Shallom, T. Mason, K. Yu, C. Fujii, J. Pederson, K. Shen, L. Zhou, G. G. Sutton, R. Clayton, O. White, H. O. Smith, C. M. Fraser, M. D. Adams, J. C. Venter, The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA. D. J. Carucci and S. L. Hoffman, Malaria Program, Naval Medical Research Institute, 12300 Washington Avenue, Rockville, MD 20852, USA. L. Aravind, Department of Biology, Texas A & M University, College...

Abstract

Chromosome 2 of Plasmodium falciparum was sequenced; this sequence contains 947,103 base pairs and encodes 210 predicted genes. In comparison with the Saccharomyces cerevisiae genome, chromosome 2 has a lower gene density, introns are more frequent, and proteins are markedly enriched in nonglobular domains. A family of surface proteins, rifins, that may play a role in antigenic variation was identified. The complete sequencing of chromosome 2 has shown that sequencing of the A+T-rich P. falciparum genome is technically feasible.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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