Targeted demethylation and activation of NLRC5 augment cancer immunogenicity through MHC class I

Author:

Sun Xin1ORCID,Watanabe Toshiyuki1,Oda Yoshitaka2,Shen Weidong3,Ahmad Alaa1,Ouda Ryota1,de Figueiredo Paul4567,Kitamura Hidemitsu38ORCID,Tanaka Shinya29ORCID,Kobayashi Koichi S.1410ORCID

Affiliation:

1. Department of Immunology, Graduate School of Medicine, Hokkaido University, Sapporo 060-8638, Japan

2. Department of Cancer Pathology, Graduate School of Medicine, Hokkaido University, Hokkaido, Sapporo 060-8638, Japan

3. Division of Functional Immunology, Section of Disease Control, Institute for Genetic Medicine, Hokkaido University, Sapporo 060-8638, Japan

4. Department of Microbial Pathogenesis and Immunology, Texas A&M Health Science Center, Bryan, TX 77807

5. Department of Molecular Microbiology and Immunology, University of Missouri School of Medicine, Columbia, MO 65211

6. Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211

7. Department of Veterinary Pathobiology, University of Missouri School of Veterinary Medicine, Columbia, MO 65211

8. Department of Biomedical Engineering, Faculty of Science and Engineering, Toyo University, Kawagoe 350-8585, Japan

9. Institute for Chemical Reaction Design and Discovery, Hokkaido University, Sapporo 001-0021, Japan

10. Institute for Vaccine Research and Development, Hokkaido University, Sapporo 060-8638, Japan

Abstract

Impaired expression of MHC (major histocompatibility complex) class I in cancers constitutes a major mechanism of immune evasion. It has been well documented that the low level of MHC class I is associated with poor prognosis and resistance to checkpoint blockade therapies. However, there is lmited approaches to specifically induce MHC class I to date. Here, we show an approach for robust and specific induction of MHC class I by targeting an MHC class I transactivator (CITA)/NLRC5, using a CRISPR/Cas9-based gene-specific system, designated TRED-I (Targeted reactivation and demethylation for MHC-I). The TRED-I system specifically recruits a demethylating enzyme and transcriptional activators on the NLRC5 promoter, driving increased MHC class I antigen presentation and accelerated CD8+ T cell activation. Introduction of the TRED-I system in an animal cancer model exhibited tumor-suppressive effects accompanied with increased infiltration and activation of CD8+ T cells. Moreover, this approach boosted the efficacy of checkpoint blockade therapy using anti-PD1 (programmed cell death protein) antibody. Therefore, targeting NLRC5 by this strategy provides an attractive therapeutic approach for cancer.

Funder

MEXT | Japan Society for the Promotion of Science

Japan Agency for Medical Research and Development

MEXT | Japan Science and Technology Agency

Takeda Science Foundation

BMS | Bristol-Myers Squibb Canada

SENSHIN Medical Research Foundation

Hitachi Global Foundation

Kobayashi Foundation

Toyo Suisan Foundation

DX Doctoral Fellowship

Publisher

Proceedings of the National Academy of Sciences

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