A partnership between the lipid scramblase XK and the lipid transfer protein VPS13A at the plasma membrane

Author:

Guillén-Samander Andrés1234,Wu Yumei1234ORCID,Pineda S. Sebastian567,García Francisco J.89,Eisen Julia N.1234,Leonzino Marianna123410,Ugur Berrak1234,Kellis Manolis567,Heiman Myriam89,De Camilli Pietro123411ORCID

Affiliation:

1. Department of Neuroscience, Yale University School of Medicine, New Haven, CT 06510

2. Department of Cell Biology, Yale University School of Medicine, New Haven, CT 06510

3. HHMI, Yale University School of Medicine, New Haven, CT 06510

4. Program in Cellular Neuroscience, Neurodegeneration, and Repair, Yale University School of Medicine, New Haven, CT 06510

5. Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA 02142

6. Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139

7. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142

8. Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139

9. Picower Institute for Learning and Memory, Massachusetts Institute of Technology, Cambridge, MA 02139

10. Institute of Neuroscience, Consiglio Nazionale delle Ricerche, Rozzano, Milan 20089, Italy

11. Kavli Institute for Neuroscience, Yale University School of Medicine, New Haven, CT 06510

Abstract

Chorea-acanthocytosis (ChAc) and McLeod syndrome are diseases with shared clinical manifestations caused by mutations in VPS13A and XK, respectively. Key features of these conditions are the degeneration of caudate neurons and the presence of abnormally shaped erythrocytes. XK belongs to a family of plasma membrane (PM) lipid scramblases whose action results in exposure of PtdSer at the cell surface. VPS13A is an endoplasmic reticulum (ER)-anchored lipid transfer protein with a putative role in the transport of lipids at contacts of the ER with other membranes. Recently VPS13A and XK were reported to interact by still unknown mechanisms. So far, however, there is no evidence for a colocalization of the two proteins at contacts of the ER with the PM, where XK resides, as VPS13A was shown to be localized at contacts between the ER and either mitochondria or lipid droplets. Here we show that VPS13A can also localize at ER–PM contacts via the binding of its PH domain to a cytosolic loop of XK, that such interaction is regulated by an intramolecular interaction within XK, and that both VPS13A and XK are highly expressed in the caudate neurons. Binding of the PH domain of VPS13A to XK is competitive with its binding to intracellular membranes that mediate other tethering functions of VPS13A. Our findings support a model according to which VPS13A-dependent lipid transfer between the ER and the PM is coupled to lipid scrambling within the PM. They raise the possibility that defective cell surface exposure of PtdSer may be responsible for neurodegeneration.

Funder

HHS | NIH | National Institute on Drug Abuse

HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases

HHS | NIH | National Institute of Neurological Disorders and Stroke

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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