OTG-snpcaller: An Optimized Pipeline Based on TMAP and GATK for SNP Calling from Ion Torrent Data-Reference-Cited by-同舟云学术

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OTG-snpcaller: An Optimized Pipeline Based on TMAP and GATK for SNP Calling from Ion Torrent Data

Published:2014-05-13 Issue:5 Volume:9 Page:e97507
ISSN:1932-6203
Container-title:PLoS ONE
language:en
Short-container-title:PLoS ONE

Author:

Zhu Pengyuan,He Lingyu,Li Yaqiao,Huang Wenpan,Xi Feng,Lin Lin,Zhi Qihuan,Zhang Wenwei,Tang Y. Tom,Geng Chunyu,Lu Zhiyuan,Xu Xun

Publisher

Public Library of Science (PLoS)

Subject

Multidisciplinary

Reference18 articles.

1. Performance comparison of benchtop high-throughput sequencing platforms;NJ Loman;Nat Biotechnol,2012

2. Updating benchtop sequencing performance comparison;S Junemann;Nat Biotechnol,2013

3. Performance comparison of exome DNA sequencing technologies;MJ Clark;Nat Biotechnol,2011

4. Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing;A Gnirke;Nat Biotechnol,2009

5. Accuracy and quality of massively parallel DNA pyrosequencing;SM Huse;Genome Biol,2007

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