Predicting seasonal influenza using supermarket retail records

Author:

Miliou IoannaORCID,Xiong Xinyue,Rinzivillo SalvatoreORCID,Zhang QianORCID,Rossetti GiulioORCID,Giannotti FoscaORCID,Pedreschi DinoORCID,Vespignani Alessandro

Abstract

Increased availability of epidemiological data, novel digital data streams, and the rise of powerful machine learning approaches have generated a surge of research activity on real-time epidemic forecast systems. In this paper, we propose the use of a novel data source, namely retail market data to improve seasonal influenza forecasting. Specifically, we consider supermarket retail data as a proxy signal for influenza, through the identification of sentinel baskets, i.e., products bought together by a population of selected customers. We develop a nowcasting and forecasting framework that provides estimates for influenza incidence in Italy up to 4 weeks ahead. We make use of the Support Vector Regression (SVR) model to produce the predictions of seasonal flu incidence. Our predictions outperform both a baseline autoregressive model and a second baseline based on product purchases. The results show quantitatively the value of incorporating retail market data in forecasting models, acting as a proxy that can be used for the real-time analysis of epidemics.

Funder

H2020 Research Infrastructures

ISTI-CNR Grant for Young Mobility

National Institute of General Medical Sciences of the National Institutes of Health

Publisher

Public Library of Science (PLoS)

Subject

Computational Theory and Mathematics,Cellular and Molecular Neuroscience,Genetics,Molecular Biology,Ecology,Modeling and Simulation,Ecology, Evolution, Behavior and Systematics

Reference69 articles.

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