Community-based benchmarking improves spike rate inference from two-photon calcium imaging data-Reference-Cited by-同舟云学术

Community-based benchmarking improves spike rate inference from two-photon calcium imaging data

Published:2018-05-21 Issue:5 Volume:14 Page:e1006157
ISSN:1553-7358
Container-title:PLOS Computational Biology
language:en
Short-container-title:PLoS Comput Biol

Author:

Berens Philipp^ORCID,Freeman Jeremy,Deneux Thomas^ORCID,Chenkov Nikolay,McColgan Thomas^ORCID,Speiser Artur,Macke Jakob H.,Turaga Srinivas C.^ORCID,Mineault Patrick^ORCID,Rupprecht Peter^ORCID,Gerhard Stephan^ORCID,Friedrich Rainer W.^ORCID,Friedrich Johannes^ORCID,Paninski Liam,Pachitariu Marius^ORCID,Harris Kenneth D.^ORCID,Bolte Ben,Machado Timothy A.,Ringach Dario,Stone Jasmine^ORCID,Rogerson Luke E.,Sofroniew Nicolas J.,Reimer Jacob,Froudarakis Emmanouil^ORCID,Euler Thomas^ORCID,Román Rosón Miroslav,Theis Lucas,Tolias Andreas S.^ORCID,Bethge Matthias

Funder

Bundesministerium für Bildung und Forschung

Deutsche Forschungsgemeinschaft

Wellcome Trust

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Boehringer Ingelheim Fonds

Novartis Stiftung für Medizinisch-Biologische Forschung

Simmons Family Foundation (US)

Army Research Laboratory

National Institutes of Health

Defense Advanced Research Projects Agency

Intelligence Advanced Research Projects Activity

Publisher

Public Library of Science (PLoS)

Subject

Computational Theory and Mathematics,Cellular and Molecular Neuroscience,Genetics,Molecular Biology,Ecology,Modelling and Simulation,Ecology, Evolution, Behavior and Systematics

Reference29 articles.

1. Imaging in vivo: watching the brain in action;JN Kerr;Nature Reviews Neuroscience,2008

2. Comprehensive imaging of cortical networks;S Peron;Current Opinion in Neurobiology,2015

3. Three-dimensional mapping of microcircuit correlation structure;RJ Cotton;Frontiers in neural circuits,2013

4. High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision;BF Grewe;Nature methods,2010

5. Robustness of spike deconvolution for calcium imaging of neural spiking;M Pachitariu;bioRxiv,2017

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