Template-Based Modeling of Protein-RNA Interactions-Reference-Cited by-同舟云学术

Template-Based Modeling of Protein-RNA Interactions

Published:2016-09-23 Issue:9 Volume:12 Page:e1005120
ISSN:1553-7358
Container-title:PLOS Computational Biology
language:en
Short-container-title:PLoS Comput Biol

Author:

Zheng Jinfang,Kundrotas Petras J.,Vakser Ilya A.,Liu Shiyong^ORCID

Funder

National Natural Science Foundation of China

National High Technology Research and Development Program of China

the Fundamental Research Funds for the Central Universities

National Institutes of Health

National Science Foundation

Publisher

Public Library of Science (PLoS)

Subject

Computational Theory and Mathematics,Cellular and Molecular Neuroscience,Genetics,Molecular Biology,Ecology,Modeling and Simulation,Ecology, Evolution, Behavior and Systematics

Reference58 articles.

1. miRBase: annotating high confidence microRNAs using deep sequencing data;A Kozomara;Nucleic acids research,2014

2. LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs;L Ma;Nucleic acids research,2015

3. Long noncoding RNA as modular scaffold of histone modification complexes;MC Tsai;Science,2010

4. Rise of the RNA machines: exploring the structure of long non-coding RNAs;IV Novikova;J Mol Biol,2013

5. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts;AG Baltz;Mol Cell,2012

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