Identifying predictors of varices grading in patients with cirrhosis using ensemble learning
Author:
Bayani Azadeh1, Hosseini Azamossadat1, Asadi Farkhondeh1, Hatami Behzad2, Kavousi Kaveh3, Aria Mehrdad4, Zali Mohammad Reza2
Affiliation:
1. Department of Health Information Technology and Management, School of Allied Medical Sciences , Shahid Beheshti University of Medical Sciences , Tehran , Iran 2. Gastroenterology and Liver Diseases Research Center , Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences , Tehran , Iran 3. Laboratory of Complex Biological Systems and Bioinformatics (CBB), Department of Bioinformatics , Institute of Biochemistry and Biophysics (IBB), University of Tehran , Tehran , Iran 4. Department of Computer Engineering, Faculty of Electrical and Computer Engineering , Shiraz University , Shiraz , Iran
Abstract
Abstract
Objectives
The present study was conducted to improve the performance of predictive methods by introducing the most important factors which have the highest effects on the prediction of esophageal varices (EV) grades among patients with cirrhosis.
Methods
In the present study, the ensemble learning methods, including Catboost and XGB classifier, were used to choose the most potent predictors of EV grades solely based on routine laboratory and clinical data, a dataset of 490 patients with cirrhosis gathered. To increase the validity of the results, a five-fold cross-validation method was applied. The model was conducted using python language, Anaconda open-source platform. TRIPOD checklist for prediction model development was completed.
Results
The Catboost model predicted all the targets correctly with 100% precision. However, the XGB classifier had the best performance for predicting grades 0 and 1, and totally the accuracy was 91.02%. The most significant variables, according to the best performing model, which was CatBoost, were child score, white blood cell (WBC), vitalism K (K), and international normalized ratio (INR).
Conclusions
Using machine learning models, especially ensemble learning models, can remarkably increase the prediction performance. The models allow practitioners to predict EV risk at any clinical visit and decrease unneeded esophagogastroduodenoscopy (EGD) and consequently reduce morbidity, mortality, and cost of the long-term follow-ups for patients with cirrhosis.
Publisher
Walter de Gruyter GmbH
Subject
Biochemistry (medical),Clinical Biochemistry,General Medicine
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