Structural, Hirshfeld surface and theoretical analysis of two conformational polymorphs of N,N′-bis(pyridin-3-ylmethyl)oxalamide

Author:

Jotani Mukesh M.1,Zukerman-Schpector Julio2,Madureira Lucas Sousa2,Poplaukhin Pavel3,Arman Hadi D.4,Miller Tyler4,Tiekink Edward R.T.5

Affiliation:

1. Department of Physics , Bhavan’s Sheth R. A. College of Science, Ahmedabad, Gujarat 380001, India

2. Laboratório de Cristalografia , Estereodinâmica e Modelagem Molecular, Departamento de Química , Universidade Federal de São Carlos, C.P. 676, São Carlos, SP, 13565-905, Brazil

3. Chemical Abstracts Service, 2540 Olentangy River Rd, Columbus, Ohio, 43202, USA

4. Department of Chemistry , The University of Texas at San Antonio , One UTSA Circle, San Antonio, Texas 78249-0698, USA

5. Research Centre for Crystalline Materials, Faculty of Science and Technology, Sunway University , 47500 Bandar Sunway, Selangor Darul Ehsan, Malaysia

Abstract

Abstract The common feature of two conformational polymorphs of N,N′-bis(pyridin-3-ylmethyl)oxalamide is their crystallisation in the monoclinic space group P21/c with Z=4. In low symmetry form 1, the central core is effectively planar and the terminal pyridyl rings adopt a syn-periplanar conformation. In the high symmetry form, 2, there are two independent molecules in the asymmetric unit but each is located about a centre of inversion. The rings again are almost perpendicular to the central plane but, from symmetry are anti-periplanar. Computational chemistry shows that symmetric molecules with syn (two-fold) and anti (centrosymmetric) conformations have nearly identical energies. In the molecular packing of each of 1 and 2, supramolecular tapes based on amide-N–H···O(amide) hydrogen bonding are found. In 1, these are connected into layers by C–H···N(pyridyl) interactions, while in 2, the chains are linked into a three-dimensional architecture by C–H···N(pyridyl) interactions. The importance of hydrogen bonding is emphasised in the analysis of the Hirshfeld surfaces.

Publisher

Walter de Gruyter GmbH

Subject

Inorganic Chemistry,Condensed Matter Physics,General Materials Science

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