Characterization of a novel class of glyoxylate reductase belonging to the β-hydroxyacid dehydrogenase family in Acetobacter aceti

Author:

Kumsab Jakkaphan1,Tobe Ryuta1,Kurihara Tatsuo2,Hirose Yuu3,Omori Taketo4,Mihara Hisaaki1

Affiliation:

1. College of Life Sciences, Ritsumeikan University, Kusatsu, Japan

2. Institute for Chemical Research, Kyoto University, Kyoto, Japan

3. Department of Applied Chemistry and Life Science, Toyohashi University of Technology, Toyohashi, Japan

4. Department of Biomedical Engineering, Osaka Institute of Technology, Osaka, Japan

Abstract

Abstract Enzymes related to β-hydroxyacid dehydrogenases/3-hydroxyisobutyrate dehydrogenases are ubiquitous, but most of them have not been characterized. An uncharacterized protein with moderate sequence similarities to Gluconobacter oxydans succinic semialdehyde reductase and plant glyoxylate reductases/succinic semialdehyde reductases was found in the genome of Acetobacter aceti JCM20276. The corresponding gene was cloned and expressed in Escherichia coli. The gene product was purified and identified as a glyoxylate reductase that exclusively catalyzed the NAD(P)H-dependent reduction of glyoxylate to glycolate. The strict substrate specificity of this enzyme to glyoxylate, the diverged sequence motifs for its binding sites with cofactors and substrates, and its phylogenetic relationship to homologous enzymes suggested that this enzyme represents a novel class of enzymes in the β-hydroxyacid dehydrogenase family. This study may provide an important clue to clarify the metabolism of glyoxylate in bacteria. Abbreviations: GR: glyoxylate reductase; GRHPR: glyoxylate reductase/hydroxypyruvate reductase; HIBADH: 3-hydroxyisobutyrate dehydrogenase; SSA: succinic semialdehyde; SSAR: succinic semialdehyde reductase

Funder

Program for the Third-Phase R-GIRO Research

Ritsumeikan Global Innovation Research Organization

Ritsumeikan University and by the International Collaborative Research Program of Institute for Chemical Research, Kyoto University

Publisher

Oxford University Press (OUP)

Subject

Organic Chemistry,Molecular Biology,Applied Microbiology and Biotechnology,General Medicine,Biochemistry,Analytical Chemistry,Biotechnology

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