Aligning to the sample-specific reference sequence to optimize the accuracy of next-generation sequencing analysis for hepatitis B virus-Reference-Cited by-同舟云学术

Aligning to the sample-specific reference sequence to optimize the accuracy of next-generation sequencing analysis for hepatitis B virus

Published:2015-07-25 Issue:1 Volume:10 Page:147-157
ISSN:1936-0533
Container-title:Hepatology International
language:en
Short-container-title:Hepatol Int

Author:

Liu Wen-Chun,Lin Chih-Peng,Cheng Chun-Pei,Ho Cheng-Hsun,Lan Kuo-Lun,Cheng Ji-Hong,Yen Chia-Jui,Cheng Pin-Nan,Wu I-Chin,Li I-Chen,Chang Bill Chia-Han,Tseng Vincent S.,Chiu Yen-Cheng,Chang Ting-Tsung

Funder

Ministry of Science and Technology of Taiwan

the Infectious Disease and Signaling Research Center of National Cheng Kung University

Publisher

Springer Science and Business Media LLC

Subject

Hepatology

Link

http://link.springer.com/content/pdf/10.1007/s12072-015-9645-x.pdf

Reference28 articles.

1. Ley TJ, Mardis ER, Ding L, Fulton B, McLellan MD, Chen K, et al. DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome. Nature 2008;456:66–72

2. Isakov O, Modai S, Shomron N. Pathogen detection using short-RNA deep sequencing subtraction and assembly. Bioinformatics 2011;27:2027–2030

3. Lok AS, McMahon BJ. Chronic hepatitis B. Hepatology 2007;45:507–539

4. EASL clinical practice guidelines. Management of chronic hepatitis B virus infection. J Hepatol 2012;57:167–185

5. Liaw YF, Chu CM. Hepatitis B virus infection. Lancet 2009;373:582–592

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