First complete genome sequence and detection of garlic yellow curl virus in the Philippines, a member of a novel genus of the family Betaflexiviridae-Reference-Cited by-同舟云学术

First complete genome sequence and detection of garlic yellow curl virus in the Philippines, a member of a novel genus of the family Betaflexiviridae

Published:2024-03-25 Issue:3 Volume:131 Page:1107-1112
ISSN:1861-3829
Container-title:Journal of Plant Diseases and Protection
language:en
Short-container-title:J Plant Dis Prot

Author:

Cortaga Cris Q.^ORCID,Fronda Monica F.^ORCID,Lantican Darlon V.^ORCID,Jose Karl Vincent J.^ORCID,Dela Cueva Fe M.^ORCID,Dolores Lolita M.

Funder

University of the Philippines System Enhanced Creative Work and Research Grant

Publisher

Springer Science and Business Media LLC

Link

https://link.springer.com/content/pdf/10.1007/s41348-024-00904-2.pdf

Reference19 articles.

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2. Babraham Bioinformatics (2011) FastQC: a quality control tool for high throughput sequence data. Babraham Institute, Cambridge. https://www.bioinformatics.babraham.ac.uk/projects/fastqc/

3. Bolger AM, Lohse M, Usadel B (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30(15):2114–2120

4. Da Silva LA, Oliveira AS, Melo FL, Ardisson-Araújo DM, Resende FV, Resende RO, Ribeiro BM (2019) A new virus found in garlic virus complex is a member of possible novel genus of the family Betaflexiviridae (order Tymovirales). PeerJ 7:e6285

5. Haas BJ, Papanicolaou A, Yassour M, Grabherr M, Blood PD, Bowden J et al (2013) De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis. Nat Prot 8(8):1494–1512