CLUS_GPU-BLASTP: accelerated protein sequence alignment using GPU-enabled cluster
Author:
Publisher
Springer Science and Business Media LLC
Subject
Hardware and Architecture,Information Systems,Theoretical Computer Science,Software
Link
http://link.springer.com/article/10.1007/s11227-017-2036-4/fulltext.html
Reference21 articles.
1. Nair AS (2007) Computational biology & bioinformatics: a gentle overview. J Commun Comput Soc India 2:1–13
2. Troyanskaya OG, Dolinski K, Owen AB, Altman AB, Botstein D (2003) A Bayesian framework for combining heterogeneous data sources for gene function prediction. Proc Natl Acad Sci 100(14):8348–8353
3. Korpar M, Sosic M, Blazeka D, Sikic M (2015) SW#db: GPU-accelerated exact sequence similarity database search. J PLoS One 10(12). http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0145857
4. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
5. Ling C, Benkrid K (2010) Design and implementation of a CUDA-compatible GPU-based core for gapped BLAST algorithm. In: Proceedings of International Conference on Computational Science, pp 495–504
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