Complete sequential assignment and secondary structure prediction of the cannulae forming protein CanA from the hyperthermophilic archaeon Pyrodictium abyssi

Author:

Kreitner Raphael,Munte Claudia E.ORCID,Singer Katrin,Stetter Karl O.,Horn Gudrun,Kremer Werner,Kalbitzer Hans RobertORCID

Abstract

AbstractCanA from Pyrodictium abyssi forms a heat-resistant organic hollow-fiber network together with CanB and CanC. An N-terminally truncated construct of CanA (K1-CanA) gave NMR spectra of good quality that could be assigned by three-dimensional NMR methods on 15N and 13C–15N enriched protein. We assigned the chemical shifts of 96% of all backbone 1HN atoms, 98% of all backbone 15N atoms, 100% of all 13Cα atoms, 100% of all 1Hα atoms, 90% of all 13C′ atoms, and 100% of the 13Cβ atoms. Two short helices and 10 β-strands are estimated from an analysis of the chemical shifts leading to a secondary structure content of K1-CanA of 6% helices, 44% β-pleated sheets, and 50% coils.

Funder

Deutsche Forschungsgemeinschaft

FCI

Publisher

Springer Science and Business Media LLC

Subject

Biochemistry,Structural Biology

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