RNA-seq analysis in forest tree species: bioinformatic problems and solutions-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

RNA-seq analysis in forest tree species: bioinformatic problems and solutions

Published:2016-03-31 Issue:2 Volume:12 Page:
ISSN:1614-2942
Container-title:Tree Genetics & Genomes
language:en
Short-container-title:Tree Genetics & Genomes

Author:

López de Heredia Unai,Vázquez-Poletti José Luis

Funder

OAPN - Spanish Ministry of Agriculture, Food and Environment

Publisher

Springer Science and Business Media LLC

Subject

Horticulture,Genetics,Molecular Biology,Forestry

Link

http://link.springer.com/content/pdf/10.1007/s11295-016-0995-x.pdf

Reference156 articles.

1. Abbott E, Hall D, Hamberger B, Bohlmann J (2010) Laser microdissection of conifer stem tissues: isolation and analysis of high quality RNA, terpene synthase enzyme activity and terpenoid metabolites from resin ducts and cambial zone tissue of white spruce (Picea glauca). BMC Plant Biol 10:106. doi: 10.1186/1471-2229-10-106

2. Äijö T, Butty V, Chen Z, Salo V, Tripathi S, Burge CB, Lahesmaa R, Lähdesmäki H (2014) Methods for time series analysis of RNA-seq data with application to human Th17 cell differentiation. Bioinformatics 30(12):i113–20. doi: 10.1093/bioinformatics/btu274

3. Anders S, Huber W (2010) Differential expression analysis for sequence count data. Genome Biol 11(10):R106. doi: 10.1186/gb-2010-11-10-r106

4. Anders S, Reyes A, Huber W (2012) Detecting differential usage of exons from RNA-seq data. Genome Res 22(10):2008–17. doi: 10.1101/gr.133744.111

5. Au KF, Jiang H, Lin L, Xing Y, Wong WH (2010) Detection of splice junctions from paired-end RNA-seq data by SpliceMap. Nucleic Acids Res 38(14):4570–8. doi: 10.1093/nar/gkq211

Cited by 27 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. AN OPTIMISED METHOD FOR EXTRACTION OF HIGH-QUALITY RNA FOR RNA-SEQ FROM AMAZONIAN TREES;JOURNAL OF TROPICAL FOREST SCIENCE;2024-05-13

2. Systems Biology as a Tool to Uncover Interdisciplinary Links within the Complex Forest Tree System;Monitoring Forest Damage with Metabolomics Methods;2023-11-03

3. An Efficient Filter and Wrapper based Selection Methods along With Random Forest and Support Vector Machines Classification Technique in Health Care System;Journal of Machine and Computing;2023-10-05

4. DEGoldS: A Workflow to Assess the Accuracy of Differential Expression Analysis Pipelines through Gold-standard Construction;Current Bioinformatics;2023-05

5. Analysis of Gene Expression Differences Between Eastern and Western Loblolly Pine Seed Sources;2023-04-28

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3