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NP-completeness of the energy barrier problem without pseudoknots and temporary arcs

  • Published:2010-11-26 Issue:1 Volume:10 Page:391-405
  • ISSN:1567-7818
  • Container-title:Natural Computing
  • language:en
  • Short-container-title:Nat Comput

Author:

Maňuch Ján,Thachuk Chris,Stacho Ladislav,Condon Anne

Publisher

Springer Science and Business Media LLC

Subject

Computer Science Applications

Reference22 articles.

1. Chen SJ, Dill KA (2000) RNA folding energy landscapes. Proc Nat Acad Sci 97(2):646–651

2. Flamm C, Fontana W, Hofacker IL, Schuster P (2000) RNA folding at elementary step resolution. RNA 6:325–338

3. Flamm C, Hofacker IL, Stadler PF, Wolfinger MT (2002) Barrier trees of degenerate landscapes. Zeitschrift für Physikalische Chemie 216:155–174

4. Garey MR, Johnson DS (1979) Computers and Intractability: a guide to the theory of NP-completeness. W. H. Freeman & Co., New York, NY, USA

5. Graham R, Knuth D, Patashnik O (1989) Concrete mathematics: a foundation for computer science. Addison-Wesley, Reading, MA, USA

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2. Predicting Algorithms and Complexity in RNA Structure Based on BHG;2020 16th International Conference on Computational Intelligence and Security (CIS);2020-11

3. Finding the direct optimal RNA barrier energy and improving pathways with an arbitrary energy model;Bioinformatics;2020-07-01

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5. Computational approaches for alternative and transient secondary structures of ribonucleic acids;Briefings in Functional Genomics;2018-06-20
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