Comparative study of de novo assembly and genome-guided assembly strategies for transcriptome reconstruction based on RNA-Seq
Author:
Publisher
Springer Science and Business Media LLC
Subject
General Agricultural and Biological Sciences,General Environmental Science,General Biochemistry, Genetics and Molecular Biology
Link
http://link.springer.com/content/pdf/10.1007/s11427-013-4442-z.pdf
Reference36 articles.
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3. Martin J, Bruno V M, Fang Z, et al. Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads. BMC Genomics, 2010, 11: 663
4. Martin J A, Wang Z. Next-generation transcriptome assembly. Nat Rev Genet, 2011, 12: 671–682
5. Trapnell C, Roberts A, Goff L, et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc, 2012, 7: 562–578
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