Description and genomic characterization of Massiliimalia massiliensis gen. nov., sp. nov., and Massiliimalia timonensis gen. nov., sp. nov., two new members of the family Ruminococcaceae isolated from the human gut-Reference-Cited by-同舟云学术

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Description and genomic characterization of Massiliimalia massiliensis gen. nov., sp. nov., and Massiliimalia timonensis gen. nov., sp. nov., two new members of the family Ruminococcaceae isolated from the human gut

Published:2019-01-28 Issue:6 Volume:112 Page:905-918
ISSN:0003-6072
Container-title:Antonie van Leeuwenhoek
language:en
Short-container-title:Antonie van Leeuwenhoek

Author:

Afouda Pamela,Traore Sory Ibrahima,Dione Niokhor,Andrieu Claudia,Tomei Enora,Richez Magali,Di Pinto Fabrizio,Lagier Jean-Christophe,Dubourg Grégory,Raoult Didier,Fournier Pierre-Edouard

Funder

Fondation Méditerranée Infection

Agence Nationale de la Recherche

Région Provence-Alpes-Côte d'Azur

European funding FEDER PRIMI

Publisher

Springer Science and Business Media LLC

Subject

Molecular Biology,General Medicine,Microbiology

Link

http://link.springer.com/article/10.1007/s10482-018-01223-x/fulltext.html

Reference53 articles.

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2. Bankevich A, Nurk S, Antipov D et al (2012) SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol 19:455–477. https://doi.org/10.1089/cmb.2012.0021

3. Benson DA, Karsch-Mizrachi I, Clark K et al (2012) GenBank. Nucleic Acids Res 40:D48–53. https://doi.org/10.1093/nar/gkr1202

4. Bolger AM, Lohse M, Usadel B (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinform Oxf Engl 30:2114–2120. https://doi.org/10.1093/bioinformatics/btu170

5. Browne HP, Forster SC, Anonye BO et al (2016) Culturing of “unculturable” human microbiota reveals novel taxa and extensive sporulation. Nature 533:543–546. https://doi.org/10.1038/nature17645

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