The Characterization of Prokaryotic Diversity in Lake Beyşehir Using a 16s Metagenomics Study

Author:

PAT Fahri1ORCID,FİDAN PEDÜK Sultan1ORCID,AKÇAY Neşe2ORCID,KIZIL PAT Hatice KübraORCID,ARICAN Ercan3ORCID

Affiliation:

1. İSTANBUL ÜNİVERSİTESİ, FEN BİLİMLERİ ENSTİTÜSÜ, MOLEKÜLER BİYOLOJİ VE GENETİK (DR)

2. İSTANBUL ÜNİVERSİTESİ, FEN BİLİMLERİ ENSTİTÜSÜ, MOLEKÜLER BİYOTEKNOLOJİ VE GENETİK (DR)

3. İstanbul Üniversitesi, Fen Fakültesi, Moleküler Biyoloji ve Genetik Bölümü

Abstract

Lake Beysehir, located in the Central Anatolia Region, is the biggest lake in Central Anatolia, providing drinking water and irrigation. It is Turkey's third-largest lake and the largest freshwater lake. Its waters are fresh water and its depth is around 8-9 m at most. The deepest point is mentioned as 12, 14, and 15 m in different sources. Although there is a lake used by such a large population in our country, there are not enough studies on microbial diversity, so revealing the diversity is important for the lake and the population around the lake. Next-generation sequencing (NGS) research has made it possible to sequence RNA and DNA considerably quicker and cheaply than in by assessing the PCR amplicon, we utilized NGS high-throughput methods for the metagenomic research of Lake Beyşehir sequences of 16S rDNA (regions V3–V4). The analyzes revealed the phylum Proteobacteria, Verrucomicrobia, Bacteroidetes and Actinobacteria.

Funder

İstanbul Üniversitesi Bilimsel Araştırma Projeleri Birimi

Publisher

Canakkale Onsekiz Mart University

Subject

Polymers and Plastics,General Environmental Science

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