Revision of the Garra species of the Hajar Mountains in Oman and the United Arab Emirates with the description of two new species (Teleostei: Cyprinidae)

Author:

KIRCHNER SANDRA,KRUCKENHAUSER LUISE,PICHLER ARTHUR,BORKENHAGEN KAI,FREYHOF JÖRG

Abstract

The Garra species inhabiting the Hajar Mountains are revised and five species are recognised, two of which are newly species described herein. Garra barreimiae, from the United Arab Emirates (UAE) and Northern Oman, is distinguished from other Garra species in the Hajar Mountains by a strongly mottled flank pattern with individual or series of midlateral orange scales, a white dorsal-fin tip, an orange spot at the upper operculum, and more gill rakers on the lower limb of the first gill arch. Garra barreimiae shawkahensis is a synonym of G. barreimiae. Garra gallagheri, from the Wadi Bani Khalid drainage in Oman, is distinguished by flank-scale margins the same colour or slightly darker than the centre of the scales. Garra longipinnis, from the interior wadis in the Central Hajar Mountains in Oman, is distinguished by flank-scale margins being clearly darker than the centre of scales. The original description of G. longipinnis was based on a few individuals with very large fins, which are here considered aberrant. Garra shamal, new species, from the coastal drainages around Muscat in Oman, is distinguished by a strongly mottled flank pattern usually without orange midlateral scales, a white dorsal-fin tip, no orange spot at the upper operculum, and middle caudal-fin rays and membranes the same colour or slightly darker than the rest of the fins in colouration. Garra sharq, new species, from the Wadi Kabbah drainage and a few interior springs in Oman, is distinguished by a strongly mottled flank pattern with individual or series of orange midlateral scales, no orange spot at the upper opercle, and dorsal-fin tip and membranes between central caudal-fin rays the same colour as the rest of the fins. All five species are well differentiated genetically and form distinct mitochondrial clades with between 2.1 and 9.2% differences (p-distances) in the mitochondrial COI. 

Publisher

Magnolia Press

Subject

Animal Science and Zoology,Ecology, Evolution, Behavior and Systematics

Reference1 articles.

1.

Banister, K.E. (1984) A subterranean population of Garra barreimiae (Teleostei: Cyprinidae) from Oman, with comments on the concept of regressive evolution. Journal of Natural History, 18, 927–938.

https://doi.org/10.1080/00222938400770811

Banister, K. E. & Clarke, M.A. (1977) The freshwater fishes of the Arabian Peninsula. The Scientific Results of the Oman Flora and Fauna Survey 1975. Journal Oman Studies, 1, 111–154.

Bayçelebi, E., Kaya, C., Turan, D., Ergüden S.A. & Freyhof, J. (2018) Redescription of Garra turcica from southern Anatolia (Teleostei: Cyprinidae). Zootaxa, 4524 (2), 227–236.

https://doi.org/10.11646/zootaxa.4524.2.6

Behrens-Chapuis, S., Herder, F., Esmaeili, H.R., Freyhof, J., Hamidan, N.A., Özuluǧ, M., Šanda, R. & Geiger, M.F. (2015) Adding nuclear rhodopsin data where mitochondrial COI indicates discrepancies-can this marker help to explain conflicts in cyprinids? DNA Barcodes, 3, 187–99.

https://doi.org/10.1515/dna-2015-0020

Biomatters (2013) Geneious Pro. Available from: http://www.geneious.com (accessed 12 July 2019)

Borkenhagen, K. (2014) A new genus and species of cyprinid fish (Actinopterygii, Cyprinidae) from the Arabian Peninsula, and its phylogenetic and zoogeographic affinities. Environmental Biology of Fishes, 97, 1179–1195

Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic acids research, 32, 1792–1797.

https://doi.org/10.1093/nar/gkh340

Edgar, R.C. (2004) MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic acids research, 32, 1792–1797.

https://doi.org/10.1093/nar/gkh340

Esmaeili, H.R., Sayyadzadeh, G., Coad, B.W. & Eagderi, S. (2016) Review of the genus Garra Hamilton, 1822 in Iran with description of a new species: a morpho-molecular approach (Teleostei : Cyprinidae). Iranian Journal of Ichthyology, 3, 82–121.

Freyhof, J., Hamidan, N.A., Feulner, G.R. & Harrison, I. (2015) Chapter 3. The Status and Distribution of Freshwater Fishes of the Arabian Peninsula. In: García, N., Harrison, I., Cox, N. & Tognelli, M.F. (compilers), The Status and Distribution of Freshwater Biodiversity in the Arabian Peninsula. IUCN, Gland, Cambridge and Arlington, pp. 16–29.

Geiger, M.F., Herder, F., Monaghan, M.T., Almada, V., Barbieri, R., Bariche, M., Berrebi, P., Bohlen, J., Casal-Lopez, M., Delmastro, G.B., Denys, G.P.J., Dettai, A., Doadrio, I., Kalogianni, E., Kärst, H., Kottelat, M., Kovačić, M., Laporte, M., Lorenzoni, M., Marčić, Z., Özuluǧ, M., Perdices, A., Perea, S., Persat, H., Porcelotti, S., Puzzi, C., Robalo, J., Sanda, R., Schneider, M., Slechtová, V., Stoumboudi, M., Walter, S. & Freyhof, J. (2014) Spatial Heterogeneity in the Mediterranean Biodiversity Hotspot Affects Barcoding Accuracy of its Freshwater Fishes. Molecular Ecology Resources, 14 (6), 1210–1221.

https://doi.org/10.1111/1755-0998.12257

Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95–98.

https://doi.org/10.14601/Phytopathol_Mediterr-14998u1.29

Hamidan, N.A., Geiger, M. & Freyhof, J. (2014) Garra jordanica, a new species from the Dead Sea basin with remarks on the relationship of G. ghorensis, G. tibanica and G. rufa (Teleostei: Cyprinidae). Ichthyological Exploration of Freshwaters, 25, 223–236.

Hashemzadeh Segherloo, I., Abdoli, A., Eagderi, S., Esmaeili, H.R., Sayyadzadeh, G., Bernatchez, L., Hallerman, E., Geiger, M.F., Özulug, M., Laroche, J. & Freyhof, J. (2017) Dressing down: convergent reduction of the mental disc in Garra (Teleostei: Cyprinidae) in the Middle East. Hydrobiologia, 785, 47–59.

https://doi.org/10.1007/s10750-016-2902-8

Hashemzadeh Segherloo, I., Normandeau, E., Benestan, L., Rougeux, C., Coté, G., Moore, J.S., Ghaedrahmati, N., Abdoli, A. & Bernatchez, L. (2018) Genetic and morphological support for possible sympatric origin of fish from subterranean habitats. Scientific Reports, 8, 2909.

https://doi.org/10.1038/s41598-018-20666-w

Huelsenbeck, J.P. & Ronquist, F. (2001) ‘MRBAYES: Bayesian inference of phylogenetic trees’, Bioinformatics, 17 (8), 754–755.

https://doi.org/10.1093/bioinformatics/17.8.754

Ivanova, N.V., Zemlak, T.S., Hanner, R.H. & Hebert, P.D.N. (2007) Universal primer cocktails for fish DNA barcoding. Molecular Ecology Notes, 7, 544–548.

https://doi.org/10.1111/j.1471-8286.2007.01748.x

Kapli, P., Lutteropp, S., Zhang, J., Kobert, K., Pavlidis, P., Stamatakis, A. & Flouri, T. (2017) Multi-rate Poisson Tree Processes for single-locus species delimitation under Maximum Likelihood and Markov Chain Monte Carlo. Bioinformatics, 33 (11), 1630–1638.

https://doi.org/10.1093/bioinformatics/btx025

Khalaf-Sakerfalke von Jaffa, N.A.B.A.T. (2009) Garra barreimiae wurayahi Khalaf, 2009: A new blind cave fish subspecies from Wadi Al Wurayah pools, Emirate of Fujairah, United Arab Emirates. Gazelle, 90, 1–15.

Khedkar, G.D., Jamdade, R., Naik, S., David, L. & Haymer, D. (2014) DNA Barcodes for the Fishes of the Narmada, One of India’s Longest Rivers. PLOS ONE, 9 (7), e101460.

https://doi.org/10.1371/journal.pone.0101460

Kirchner, S., Sattmann, H., Haring, E., Plan, L, Victor, R. & Kruckenhauser, L. (2017) Investigating gene flow between the blind cavefish Garra barreimiae and its conspecific surface populations. Scientific Reports, 7 (1), 5130. [http://www.nature.com/articles/s41598-017-05194-3]

Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16 (2), 111–120. https://doi.org/10.1007/BF01731581

Kottelat, M. & Freyhof, J. (2007) Handbook of European freshwater fishes. Kottelat, Cornol and Freyhof, Berlin, xiv + 646 pp.

Kruckenhauser, L., Haring, E., Seemann, R. & Sattmann, H. (2011) Genetic differentiation between cave and surface dwelling populations of Garra barreimiae (Cyprinidae) in Oman. BMC Evolutionary Biology, 11, 172–186.

https://doi.org/10.1186/1471-2148-11-172

Krupp, F. (1983) Fishes of Saudi Arabia: Freshwater fishes of Saudi Arabia and adjacent regions of the Arabian Peninsula. Fauna of Saudi Arabia, 5, 568–636.

Krupp, F. (1988) Freshwater fishes of the Wadi Batha drainage. Journal of Oman Studies Special Report, 3, 401–404.

Krupp, F. & Budd, K. (2009) A new species of the genus Garra (Teleostei: Cyprinidae) from Oman. Aqua, International Journal of Ichthyology, 15, 117–120.

Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. (2018) MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Molecular Biology and Evolution, 35, 1547–1549.

https://doi.org/10.1093/molbev/msy096

Lanfear, R., Frandsen, P.B., Wright, A.M., Senfeld, T. & Calcott, B. (2017) Partitionfinder 2: New methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution, 34 (3), 772–773.

https://doi.org/10.1093/molbev/msw260

Librado, P. & Rozas, J. (2009) DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451–1452.

https://doi.org/10.1093/bioinformatics/btp187

Lyon, R.G., Geiger, M.F. & Freyhof, J. (2016) Garra sindhi, a new species from the Jebel Samhan nature Reserve in Oman (Teleostei: Cyprinidae). Zootaxa, 4154 (1), 79–88.

https://doi.org/10.11646/zootaxa.4154.1.5

Masters, B.C., Fan, V. & Ross, H.A. (2011) Species delimitation—a geneious plugin for the exploration of species boundaries. Molecular Ecology Resources, 11, 154–157.

https://doi.org/10.1111/j.1755-0998.2010.02896.x

Mousavi-Sabet, H., Vatandoust, S., Fatemi, Y. & Eagderi, S. (2016) Tashan Cave a new cave fish locality for Iran; and Garra tashanensis, a new blind species from the Tigris River drainage (Teleostei: Cyprinidae). FishTaxa, 1 (3), 133–148.

Nebeshwar, K. & Vishwanath. W. (2013) Three new species of Garra (Pisces: Cyprinidae) from north-eastern India and redescription of G. gotyla. Ichthyological Exploration of Freshwaters, 24, 97–120.

Pichler, A., Ahnelt, H., Kirchner, S., Sattmann, H., Haring, E., Handschuh, S., Freyhof, J., Victor, R. & Kruckenhauser, L. (2018) The morphological diversity of Garra barreimiae (Teleostei: Cyprinidae). Environmental Biology of Fishes, 101, 1053–1065.

https://doi.org/10.1007/s10641-018-0758-7

Posada, D. & Crandall, K.A. (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics, 14, 817–818.

https://doi.org/10.1093/bioinformatics/14.9.817

Saitou, N. & Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4 (4), 406–425.

https://doi.org/10.1093/oxfordjournals.molbev.a040454

Sayyadzadeh, G., Esmaeili, H.R. & Freyhof, J. (2015) Garra mondica, a new species from the Mond River drainage with remarks on the genus Garra from the Persian Gulf basin in Iran (Teleostei: Cyprinidae). Zootaxa, 4048 (1), 75–89.

https://doi.org/ 10.11646/zootaxa.4048.1.4

Stiassny, M.L.J. & Getahun, A. (2007) An overview of labeonin relationships and the phylogenetic placement of the Afro-Asian genus Garra Hamilton, 1922 (Teleostei: Cyprinidae), with the description of five new species of Garra from Ethiopia and a key to all African species. Zoological Journal of the Linnean Society, 150, 41–83.

https://doi.org/10.1111/j.1096-3642.2007.00281.x

Swofford, D.L. (2002) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4, Sinauer Associates, Sunderland. MA. [program]

https://doi.org/10.1111/j.0014-3820.2002.tb00191.x

Tamura, K. (1992) Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G + C-content biases. Molecular Biology and Evolution, 9, 678–687.

https://doi.org/10.1093/oxfordjournals.molbev.a040752

Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution, 30, 2725–2729.

https://doi.org/10.1093/molbev/mst197

Xia, X. (2017) DAMBE6: New tools for microbial genomics, phylogenetics, and molecular evolution, Journal of Heredity, 108 (4), 431–437.

https://doi.org/10.1093/jhered/esx033

Zhang, J., Kapli, P., Pavlidis, P. & Stamatakis, A. (2013) A general species delimitation method with applications to phylogenetic placements. Bioinformatics, 29 (22), 2869–2876.

https://doi.org/10.1093/bioinformatics/btt499

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