Epidemiological cut-off values for Vibrio anguillarum MIC and disc diffusion data generated by standardised methods

Author:

Smith P1,Le Devendec L2,Jouy E2,Larvor E2,Le Breton A3,Picon-Camacho S3,Zrnčić S4,Zupičić IG5,Oraić D4,Karataş S5,Verner-Jeffreys D67,Joseph AW67,Light E8,van Essen-Zandbergen A9,van Gelderen B9,Voorbergen-Laarman M9,Haenen OLM9,Veldman KT9,Madsen L10,Mouritsen KK10,Smith Svanevik C11,Håkonsholm F11,Vela AI1213,García M12,Florio D14,Fioravanti M14,Cortinovis L15,Pretto T15,Manfrin A15,Baron S2

Affiliation:

1. School of Natural Science, University of Galway, Galway H91 TK33, Ireland

2. Anses, Ploufragan-Plouzané-Niort Laboratory, Mycoplasmology-Bacteriology-Antibioresistance Unit, 22440 Ploufragan, France

3. Vet’eau- Selarl du Dr Alain Le Breton, 1989 Rue des Pyrénées, 31330 Grenade sur Garonne, France

4. Laboratory for Fish and Molluscs Diseases, Croatian Veterinary Institute, 10000 Zagreb, Croatia

5. Istanbul University, Faculty of Aquatic Sciences, 34234 Istanbul, Turkey

6. Centre for Environment, Fisheries and Aquaculture Science, Weymouth DT4 8UB, UK

7. UK FAO Reference Centre for AMR, Weymouth DT4 8UB, UK

8. Veterinary Medicines Directorate (VMD), Woodham Lane, New Haw, Surrey KT15 3LS, UK

9. Wageningen Bioveterinary Research, 8221 RA Lelystad, The Netherlands

10. Section for Fish and Shellfish Diseases, National Institute of Aquatic Resources (DTU Aqua), Technical University of Denmark, 2800 Kongens Lyngby, Denmark

11. Department of Contaminants and Biohazards, Institute of Marine Research, 5005 Bergen, Norway

12. Centrode Vigilancia Sanitaria Veterinaria (VISAVET), Universidad Complutense, 28040 Madrid, Spain

13. Department of Animal Health, Veterinary School, Complutense University, 28040 Madrid, Spain

14. Department of Veterinary Medical Sciences, Alma Mater Studiorum Università di Bologna, 40064, Ozzano Emilia (BO), Italy

15. Fish Pathology Unit, Istituto Zooprofilattico Sperimentale delle Venezie. 35020, Legnaro, Italy

Abstract

This work aims to generate the data needed to set epidemiological cut-off values for minimum inhibitory concentration (MIC) and disc-diffusion zone measurements of Vibrio anguillarum. A total of 261 unique isolates were tested, applying standard methods specifying incubation at 28°C for 24-28 h. Aggregated MIC distributions for a total of 247 isolates were determined in 9 laboratories for 11 agents. Data aggregations of the disc zone for the 10 agents analysed contained between 157 and 218 observations made by 4 to 7 laboratories. Acceptable ranges for quality control (QC) reference strains were available for 7 agents and the related multi-laboratory aggregated data were censored, excluding the data of a laboratory that failed to meet QC requirements. Statistical methods were applied to calculate epidemiological cut-off values. Cut-off values for MIC data were calculated for florfenicol (≤1 µg ml-1), gentamicin (≤4 µg ml-1), oxytetracycline (≤0.25 µg ml-1) and trimethoprim/sulfamethoxazole (≤0.125/2.38 µg ml-1). The cut-off values for disc zone data were calculated for enrofloxacin (≥29 mm), florfenicol (≥27 mm), gentamicin (≥19 mm), oxolinic acid (≥24 mm), oxytetracycline (≥24 mm) and trimethoprim/sulfamethoxazole (≥26 mm). MIC and disc-diffusion zone data for the other agents where not supported by QC, thus yielding only provisional cut-off values (meropenem, ceftazidime). Regardless of whether QC is available, some of the aggregated MIC distributions (enrofloxacin, oxolinic acid), disc zone (sulfamethoxazole), and MIC and disc-diffusion distributions (ampicillin, chloramphenicol) did not meet the statistical requirements. The data produced will be submitted to the Clinical Laboratory Standards Institute for their consideration in setting international consensus epidemiological cut-off values.

Publisher

Inter-Research Science Center

Subject

Aquatic Science,Ecology, Evolution, Behavior and Systematics

Reference34 articles.

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5. Baron S, Smith P, Verner-Jeffreys DW (2020) Setting epidemiological cut-off values for bacteria isolated from aquatic animals: a toolbox for designing a 96-well plate for microdilution MIC assays. Bull Eur Assoc Fish Pathol 40:55-61

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