Inhibition of SARS CoV 2 using Microbial Metabolites derived from Tannin Rich Fruit Kernels

Abstract

Severe acute respiratory syndrome corona virus 2 (SARS-CoV2) is a highly pathogenic RNA virus. Inhibition of SARS CoV 2 by molecular docking using the microbial metabolites of tannin rich fruit kernels of Punica granatum, Mangifera indica, Phyllanthus emblica and Syzygium cumini produced using a probiotic bacterium Bacillus coagulans. SARS CoV2 uses its spike proteins to inhibit the viral entry and uses main protease and chymotrypsin like protease to inhibit protein transcription, translation, maturation and replication. The accelerated immune response which is cytokine storm, can be managed by inhibiting the activation of nuclear factor kappa B (NF-κB). Excess of tissue deposition on the lung causing fibrosis can be treated by inhibiting the fibrotic pathological pathway targeting the G coupled receptor protein mediator 40 and 84 (GPR40 and GPR84) to prevent fibroblast. “Autodocking of metabolites extracted from kernel Punica granatum and Mangifera indica results in identifying 1H-Purin-6-amine, [(2-fluorophenyl) methyl] and tricarbonyl (N-cyclopent-2-en-1-yl-N-phe nyl-1-4-.eta.-cyclohexa-1,3-dienecarboxamide)iron of which 1H-Purin-6-amine, [(2-fluorophenyl)methyl] or 6-(3-fluorobenzylamino) purine appears to be very effective against SARS CoV-2 inflammation and fibrosis as evidenced by molecular docking. The role of probiotic bacteria in the synthesis of bioactive metabolites is established as very significant.