EU-OPENSCREEN: A Novel Collaborative Approach to Facilitate Chemical Biology

Author:

Brennecke Philip1,Rasina Dace2,Aubi Oscar3,Herzog Katja1,Landskron Johannes4,Cautain Bastien5,Vicente Francisca5,Quintana Jordi6,Mestres Jordi67,Stechmann Bahne1,Ellinger Bernhard8,Brea Jose9,Kolanowski Jacek L.10,Pilarski Radosław10,Orzaez Mar11,Pineda-Lucena Antonio12,Laraia Luca1314,Nami Faranak1314,Zielenkiewicz Piotr15ORCID,Paruch Kamil16,Hansen Espen17ORCID,von Kries Jens P.18,Neuenschwander Martin18,Specker Edgar19,Bartunek Petr20,Simova Sarka20,Leśnikowski Zbigniew21,Krauss Stefan2223,Lehtiö Lari24ORCID,Bilitewski Ursula25,Brönstrup Mark2627,Taskén Kjetil4282930,Jirgensons Aigars2,Lickert Heiko31,Clausen Mads H.1314,Andersen Jeanette H.17,Vicent Maria J.11,Genilloud Olga5,Martinez Aurora3,Nazaré Marc19,Fecke Wolfgang32,Gribbon Philip8

Affiliation:

1. EU-OPENSCREEN, Leibniz Research Institute for Molecular Pharmacology, Berlin, Germany

2. Organic Synthesis Methodology Group, Latvian Institute of Organic Synthesis, Riga, Latvia

3. Department of Biomedicine, University of Bergen, Bergen, Norway

4. Centre for Molecular Medicine Norway–Nordic EMBL Partnership, University of Oslo, Oslo, Norway

5. Fundación MEDINA, Health Sciences Technology Park, Granada, Spain

6. Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona, Catalunya, Spain

7. IMIM Hospital del Mar Medical Research Institute, Research Program on Biomedical Informatics (GRIB), Barcelona, Spain

8. Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Screening Port, Hamburg, Germany

9. Institute for Research in Molecular Medicine and Chronic Diseases—BioFarma Research Group, University of Santiago de Compostela, Santiago de Compostela, Spain

10. Department of Molecular Probes and Prodrugs, Institute of Bioorganic Chemistry—Polish Academy of Sciences, Poznan, Poland

11. Screening Platform, Principe Felipe Research Center, Valencia, Spain

12. Drug Discovery Unit, Health Research Institute Hospital La Fe, Valencia, Spain

13. Center for Nanomedicine and Theranostics, Department of Chemistry, Technical University of Denmark, Lyngby, Denmark

14. Technical University of Denmark, DK-OPENSCREEN, Lyngby, Denmark

15. Department of Bioinformatics, Institute of Biochemistry and Biophysics—Polish Academy of Sciences, Warsaw, Poland

16. Department of Chemistry—CZ-OPENSCREEN, Masaryk University, Brno, Czech Republic

17. The Arctic University of Norway, University of Tromsø, Marbio, Tromsø, Norway

18. Screening Unit, Leibniz Research Institute for Molecular Pharmacology, Berlin, Germany

19. Medicinal Chemistry Research Group, Leibniz Research Institute for Molecular Pharmacology, Berlin, Germany

20. Institute of Molecular Genetics of the ASCR, CZ-OPENSCREEN, Prague, Czech Republic

21. Laboratory of Molecular Virology and Biological Chemistry, Institute of Medical Biology—Polish Academy of Sciences, Łódź, Poland

22. Department of Immunology and Transfusion Medicine, Oslo University Hospital, Oslo, Norway

23. Hybrid Technology Hub—Centre of Excellence—Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway

24. Faculty of Biochemistry and Molecular Medicine—Biocenter Oulu, University of Oulu, Oulu, Finland

25. Working Group Compound Profiling and Screening, Helmholtz Centre for Infection Research, Brunswick, Germany

26. Department of Chemical Biology, Helmholtz Centre for Infection Research, Brunswick, Germany

27. German Center for Infection Research (DZIF), partner site Hannover-Brunswick, Brunswick, Germany

28. Department of Cancer Immunology—Institute for Cancer Research, Oslo University Hospital, Oslo, Norway

29. K.G. Jebsen Centre for Cancer Immunotherapy—Institute of Clinical Medicine, University of Oslo, Oslo, Norway

30. K.G. Jebsen Centre for B Cell Malignancies—Institute of Clinical Medicine, University of Oslo, Oslo, Norway

31. Institute of Diabetes and Regeneration Research, Helmholtz Centre Munich German Research Center for Environmental Health, Neuherberg, Germany

32. Central Office, Berlin, EU-OPENSCREEN, Germany

Abstract

Compound screening in biological assays and subsequent optimization of hits is indispensable for the development of new molecular research tools and drug candidates. To facilitate such discoveries, the European Research Infrastructure EU-OPENSCREEN was founded recently with the support of its member countries and the European Commission. Its distributed character harnesses complementary knowledge, expertise, and instrumentation in the discipline of chemical biology from 20 European partners, and its open working model ensures that academia and industry can readily access EU-OPENSCREEN’s compound collection, equipment, and generated data. To demonstrate the power of this collaborative approach, this perspective article highlights recent projects from EU-OPENSCREEN partner institutions. These studies yielded (1) 2-aminoquinazolin-4(3 H)-ones as potential lead structures for new antimalarial drugs, (2) a novel lipodepsipeptide specifically inducing apoptosis in cells deficient for the pVHL tumor suppressor, (3) small-molecule-based ROCK inhibitors that induce definitive endoderm formation and can potentially be used for regenerative medicine, (4) potential pharmacological chaperones for inborn errors of metabolism and a familiar form of acute myeloid leukemia (AML), and (5) novel tankyrase inhibitors that entered a lead-to-candidate program. Collectively, these findings highlight the benefits of small-molecule screening, the plethora of assay designs, and the close connection between screening and medicinal chemistry within EU-OPENSCREEN.

Funder

MEYS

National Institute on Drug Abuse

Publisher

Elsevier BV

Subject

Molecular Medicine,Biochemistry,Analytical Chemistry,Biotechnology

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