Multivariate mixtures of Polya trees for modeling ROC data

Author:

Hanson Timothy E1,Branscum Adam J2,Gardner Ian A3

Affiliation:

1. Timothy E Hanson is at Division of Biostatistics, University of Minnesota, US.

2. Adam J Branscum is at Departments of Biostatistics, Statistics, and Epidemiology, University of Kentucky, US

3. Ian A Gardner is at Department of Medicine and Epidemiology, University of California, Davis, US

Abstract

Receiver operating characteristic (ROC) curves provide a graphical measure of diagnostic test accuracy. Because ROC curves are determined using the distributions of diagnostic test outcomes for noninfected and infected populations, there is an increasing trend to develop flexible models for these component distributions. We present methodology for joint nonparametric estimation of several ROC curves from multivariate serologic data. We develop an empirical Bayes approach that allows for arbitrary noninfected and infected component distributions that are modelled using Bayesian multivariate mixtures of finite Polya trees priors. Robust, data-driven inferences forROCcurves and the area under the curve are obtained, and a straightforward method for testing a Dirichlet process versus a more general Polya tree model is presented. Computational challenges can arise when using Polya trees to model large multivariate data sets that exhibit clustering. We discuss and implement practical procedures for addressing these obstacles, which are applied to bivariate data used to evaluate the performances of two ELISA tests for detection of Johne's disease.

Publisher

SAGE Publications

Subject

Statistics, Probability and Uncertainty,Statistics and Probability

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2. Covariate-adjusted Bayesian estimation of the performance of a continuous diagnostic test with a limit of detection in the absence of a reference standard: a simulation study;Communications in Statistics - Simulation and Computation;2021-02-08

3. Bayesian nonparametric test for independence between random vectors;Computational Statistics & Data Analysis;2020-09

4. Supervised learning via smoothed Polya trees;Advances in Data Analysis and Classification;2018-10-12

5. Bayesian Nonparametric Spatially Smoothed Density Estimation;New Frontiers of Biostatistics and Bioinformatics;2018

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