Increasing adverse drug events extraction robustness on social media: Case study on negation and speculation

Author:

Scaboro Simone1,Portelli Beatrice12ORCID,Chersoni Emmanuele3,Santus Enrico4,Serra Giuseppe1

Affiliation:

1. Department of Mathematics, Computer Science and Physics, University of Udine, Udine 33100, Italy

2. Università degli Studi di Napoli Federico II, Napoli 80138, Italy

3. Department of Chinese and Bilingual Studies, The Hong Kong Polytechnic University, Hung Hom 999077, Hong Kong

4. Decision Science and Advanced Analytics for MAPV & RA, Bayer, Bayer Pharmaceuticals, Whippany, NJ 07981-1544, USA

Abstract

In the last decade, an increasing number of users have started reporting adverse drug events (ADEs) on social media platforms, blogs, and health forums. Given the large volume of reports, pharmacovigilance has focused on ways to use natural language processing (NLP) techniques to rapidly examine these large collections of text, detecting mentions of drug-related adverse reactions to trigger medical investigations. However, despite the growing interest in the task and the advances in NLP, the robustness of these models in face of linguistic phenomena such as negations and speculations is an open research question. Negations and speculations are pervasive phenomena in natural language and can severely hamper the ability of an automated system to discriminate between factual and non-factual statements in text. In this article, we take into consideration four state-of-the-art systems for ADE detection on social media texts. We introduce SNAX, a benchmark to test their performance against samples containing negated and speculated ADEs, showing their fragility against these phenomena. We then introduce two possible strategies to increase the robustness of these models, showing that both of them bring significant increases in performance, lowering the number of spurious entities predicted by the models by 60% for negation and 80% for speculations.

Publisher

SAGE Publications

Subject

General Biochemistry, Genetics and Molecular Biology

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