Activity and property landscape modeling is at the interface of chemoinformatics and medicinal chemistry

Author:

Medina-Franco José L1,Navarrete-Vázquez Gabriel2,Méndez-Lucio Oscar3

Affiliation:

1. Facultad de Química, Departamento de Farmacia, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico

2. Facultad de Farmacia, Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos 62209, Mexico

3. Centre for Molecular Informatics, Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK

Abstract

Property landscape modeling (PLM) methods are at the interface of experimental sciences and computational chemistry. PLM are becoming a common strategy to describe systematically structure–property relationships of datasets. Thus far, PLM have been used mainly in medicinal chemistry and drug discovery. Herein, we survey advances on key topics on PLM with emphasis on questions often raised regarding the outcomes of the property landscape studies. We also emphasize on concepts of PLM that are being extended to other experimental areas beyond drug discovery. Topics discussed in this paper include applications of PLM to further characterize protein–ligand interactions, the utility of PLM as a quantitative and descriptive approach, and the statistical validation of property cliffs.

Publisher

Future Science Ltd

Subject

Drug Discovery,Pharmacology,Molecular Medicine

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