Key genes and regulatory networks involved in the initiation, progression and invasion of colorectal cancer

Author:

Asghari Matin1,Abazari Mohammad Foad2,Bokharaei Hanieh3,Aleagha Maryam Nouri2,Poortahmasebi Vahdat4,Askari Hassan5,Torabinejad Sepehr2,Ardalan Abbas6,Negaresh Navid7,Ataei Atousa8,Pazooki Parisa9,Poorebrahim Mansour10

Affiliation:

1. Department of Molecular Biotechnology, Cell Science Research Center, Royan Institute of Biotechnology, ACECR, Isfahan, Iran

2. Department of Genetics, Islamic Azad University, Tehran Medical Branch, Tehran, Iran

3. Department of Genetics, Faculty of Basic Sciences, Science & Research Branch, Azad University, Tehran, Iran

4. Hepatitis B Molecular Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran

5. Department of Physiology, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran

6. Department of Biology, Faculty of Sciences, Arak University, Arak, Iran

7. Department of Medicine, Faculty of Medicine, Qom Branch, Islamic Azad University, Qom, Iran

8. Institute of Fundamental Medicine & Biology, Kazan Federal University, Kazan, Russia

9. Department of biological sciences, Tehran north branch, Islamic Azad university, Tehran, Iran

10. Department of Medical Biotechnology, School of Advanced Technologies in Medicine, Tehran University of Medical Sciences, Tehran, Iran

Abstract

Aim: Until now, identification of drug targets for treatment of patients with specific stages of colorectal cancer (CRC) has remained a challenging field of research. Herein, we aimed to identify the key genes and regulatory networks involved in each stage of CRC. Results: The results of gene expression profiles were integrated with protein–protein interaction networks, and topologically analyzed. The most important regulatory genes (e.g., CDK1, UBC, ESR1 and ATXN1) and signaling pathways (e.g., Wnt, MAPK and JAK-STAT) in CRC initiation, progression and metastasis were identified. In vitro analysis confirmed some in silico findings. Conclusion: Our study introduces functional hub genes, subnetworks, prioritizes signaling pathways and novel biomarkers in CRC that may guide further development of targeted therapy programs.

Publisher

Future Science Ltd

Subject

Biotechnology

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