Unveiling the influence of tumor and immune signatures on immune checkpoint therapy in advanced lung cancer

Author:

Kim Nayoung12,Park Sehhoon3,Jo Areum12,Eum Hye Hyeon12,Kim Hong Kwan4,Lee Kyungjong5,Cho Jong Ho4,Ku Bo Mi6,Jung Hyun Ae3,Sun Jong-Mu3,Lee Se-Hoon3,Ahn Jin Seok3,Lee Jung-Il7,Choi Jung Won7,Jeong Dasom12,Na Minsu12,Kang Huiram12,Kim Jeong Yeon8,Choi Jung Kyoon8,Lee Hae-Ock129ORCID,Ahn Myung-Ju3

Affiliation:

1. Department of Microbiology, College of Medicine, The Catholic University of Korea

2. Department of Biomedicine and Health Sciences, Graduate School, The Catholic University of Korea

3. Division of Haematology-Oncology, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine

4. Department of Thoracic and Cardiovascular Surgery, Samsung Medical Center, Sungkyunkwan University School of Medicine

5. Division of Pulmonary and Critical Care Medicine, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine

6. Research Institute for Future Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine

7. Department of Neurosurgery, Samsung Medical Center, Sungkyunkwan University School of Medicine

8. Department of Bio and Brain Engineering

9. Precision Medicine Research Center, College of Medicine, The Catholic University of Korea

Abstract

This study investigates the variability among patients with non-small cell lung cancer (NSCLC) in their responses to immune checkpoint inhibitors (ICI). Recognizing that patients with advanced-stage NSCLC rarely qualify for surgical interventions, it becomes crucial to identify biomarkers that influence responses to ICI therapy. We conducted an analysis of single-cell transcriptomes from 33 lung cancer biopsy samples, with a particular focus on 14 core samples taken before the initiation of palliative ICI treatment. Our objective was to link tumor and immune cell profiles with patient responses to ICI. We discovered that ICI non-responders exhibited a higher presence of CD4+ regulatory T cells, resident memory T cells, and TH17 cells. This contrasts with the diverse activated CD8+ T cells found in responders. Furthermore, tumor cells in non-responders frequently showed heightened transcriptional activity in the NF-kB and STAT3 pathways, suggesting a potential inherent resistance to ICI therapy. Through the integration of immune cell profiles and tumor molecular signatures, we achieved an accuracy rate exceeding 95% in predicting patient responses to ICI treatment. These results underscore the crucial importance of the interplay between tumor and immune microenvironment, including within metastatic sites, in affecting the effectiveness of ICIs in NSCLC.

Publisher

eLife Sciences Publications, Ltd

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