Comparative genomics explains the evolutionary success of reef-forming corals

Author:

Bhattacharya Debashish12,Agrawal Shobhit3,Aranda Manuel3,Baumgarten Sebastian3,Belcaid Mahdi4,Drake Jeana L5,Erwin Douglas6,Foret Sylvian78,Gates Ruth D4,Gruber David F910,Kamel Bishoy11ORCID,Lesser Michael P12,Levy Oren13,Liew Yi Jin3,MacManes Matthew14ORCID,Mass Tali515,Medina Monica11,Mehr Shaadi916,Meyer Eli17,Price Dana C18,Putnam Hollie M4,Qiu Huan1,Shinzato Chuya19,Shoguchi Eiichi19,Stokes Alexander J2021ORCID,Tambutté Sylvie22,Tchernov Dan15,Voolstra Christian R3ORCID,Wagner Nicole1,Walker Charles W14,Weber Andreas PM23,Weis Virginia17,Zelzion Ehud1,Zoccola Didier22ORCID,Falkowski Paul G524ORCID

Affiliation:

1. Department of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, United States

2. Department of Marine and Coastal Sciences, Rutgers University, New Brunswick, United States

3. Red Sea Research Center, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia

4. Hawaii Institute of Marine Biology, Kaneohe, United States

5. Environmental Biophysics and Molecular Ecology Program, Department of Marine and Coastal Sciences, Rutgers University, New Brunswick, United States

6. Smithsonian Institution, National Museum of Natural History, Washington, United States

7. ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Australia

8. Research School of Biology, Australian National University, Canberra, Australia

9. American Museum of Natural History, Sackler Institute for Comparative Genomics, New York, United States

10. Department of Natural Sciences, City University of New York, Baruch College and The Graduate Center, New York, United States

11. Department of Biology, Mueller Lab, Penn State University, University Park, United States

12. School of Marine Science and Ocean Engineering, University of New Hampshire, Durham, United States

13. The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat Gam, Israel

14. Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, United States

15. Marine Biology Department, The Leon H. Charney School of Marine Sciences, University of Haifa, Mt. Carmel, Israel

16. Biological Science Department, State University of New York, College at Old Westbury, New York, United States

17. Department of Integrative Biology, Oregon State University, Corvallis, United States

18. Department of Plant Biology and Pathology, Rutgers University, New Brunswick, United States

19. Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan

20. Laboratory of Experimental Medicine and Department of Cell and Molecular Biology, John A. Burns School of Medicine, Honolulu, United States

21. Chaminade University, Honolulu, United States

22. Centre Scientifique de Monaco, Quai Antoine Ier, Monaco

23. Institute of Plant Biochemistry, Heinrich-Heine-Universität, Düsseldorf, Germany

24. Department of Earth and Planetary Sciences, Rutgers University, New Jersey, United States

Abstract

Transcriptome and genome data from twenty stony coral species and a selection of reference bilaterians were studied to elucidate coral evolutionary history. We identified genes that encode the proteins responsible for the precipitation and aggregation of the aragonite skeleton on which the organisms live, and revealed a network of environmental sensors that coordinate responses of the host animals to temperature, light, and pH. Furthermore, we describe a variety of stress-related pathways, including apoptotic pathways that allow the host animals to detoxify reactive oxygen and nitrogen species that are generated by their intracellular photosynthetic symbionts, and determine the fate of corals under environmental stress. Some of these genes arose through horizontal gene transfer and comprise at least 0.2% of the animal gene inventory. Our analysis elucidates the evolutionary strategies that have allowed symbiotic corals to adapt and thrive for hundreds of millions of years.

Funder

National Science Foundation

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

Reference114 articles.

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