Lessons from Fraxinus, a crowd-sourced citizen science game in genomics

Author:

Rallapalli Ghanasyam1,Saunders Diane GO1,Yoshida Kentaro1,Edwards Anne2,Lugo Carlos A1,Collin Steve3,Clavijo Bernardo4,Corpas Manuel4,Swarbreck David4,Clark Matthew4,Downie J Allan2,Kamoun Sophien1ORCID,MacLean Dan1, ,

Affiliation:

1. The Sainsbury Laboratory, Norwich, United Kingdom

2. John Innes Centre, Norwich, United Kingdom

3. Norfolk Wildlife Trust, Norwich, United Kingdom

4. The Genome Analysis Centre, Norwich, United Kingdom

Abstract

In 2013, in response to an epidemic of ash dieback disease in England the previous year, we launched a Facebook-based game called Fraxinus to enable non-scientists to contribute to genomics studies of the pathogen that causes the disease and the ash trees that are devastated by it. Over a period of 51 weeks players were able to match computational alignments of genetic sequences in 78% of cases, and to improve them in 15% of cases. We also found that most players were only transiently interested in the game, and that the majority of the work done was performed by a small group of dedicated players. Based on our experiences we have built a linear model for the length of time that contributors are likely to donate to a crowd-sourced citizen science project. This model could serve a guide for the design and implementation of future crowd-sourced citizen science initiatives.

Funder

Biotechnology and Biological Sciences Research Council (BBSRC)

Department for Environment, Food and Rural Affairs (Defra)

Gatsby Charitable Foundation

John Innes Foundation

The Genome Analysis Centre

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

Reference17 articles.

1. Predicting protein structures with a multiplayer online game;Cooper;Nature,2010

2. Online citizen science games: opportunities for the biological sciences;Curtis;Applied & Translational Genomics,2014

3. Fraxinus version1 data analysis

4. Google api ruby client samples

5. Phylo: a citizen science approach for improving multiple sequence alignment;Kawrykow;PLOS ONE,2012

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3