Evolution of an intricate J-protein network driving protein disaggregation in eukaryotes

Author:

Nillegoda Nadinath B12ORCID,Stank Antonia34ORCID,Malinverni Duccio5ORCID,Alberts Niels1ORCID,Szlachcic Anna1ORCID,Barducci Alessandro67ORCID,De Los Rios Paolo58,Wade Rebecca C139ORCID,Bukau Bernd12ORCID

Affiliation:

1. Center for Molecular Biology (ZMBH), Heidelberg University, Heidelberg, Germany

2. DKFZ-ZMBH Alliance, German Cancer Research Center (DKFZ), Heidelberg, Germany

3. Heidelberg Institute for Theoretical Studies, Heidelberg, Germany

4. Heidelberg Graduate School of Mathematical and Computational Methods for the Sciences, University of Heidelberg, Heidelberg, Germany

5. Laboratory of Statistical Biophysics, School of Basic Sciences, Institute of Physics, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland

6. Inserm, U1054, Montpellier, France

7. CNRS, UMR 5048, Centre de Biochimie Structurale, Université de Montpellier, Montpellier, France

8. Institute of Bioengineering, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland

9. Interdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany

Abstract

Hsp70 participates in a broad spectrum of protein folding processes extending from nascent chain folding to protein disaggregation. This versatility in function is achieved through a diverse family of J-protein cochaperones that select substrates for Hsp70. Substrate selection is further tuned by transient complexation between different classes of J-proteins, which expands the range of protein aggregates targeted by metazoan Hsp70 for disaggregation. We assessed the prevalence and evolutionary conservation of J-protein complexation and cooperation in disaggregation. We find the emergence of a eukaryote-specific signature for interclass complexation of canonical J-proteins. Consistently, complexes exist in yeast and human cells, but not in bacteria, and correlate with cooperative action in disaggregation in vitro. Signature alterations exclude some J-proteins from networking, which ensures correct J-protein pairing, functional network integrity and J-protein specialization. This fundamental change in J-protein biology during the prokaryote-to-eukaryote transition allows for increased fine-tuning and broadening of Hsp70 function in eukaryotes.

Funder

Alexander von Humboldt-Stiftung

Klaus Tschira Stiftung

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Bundesministerium für Bildung und Forschung

Horizon 2020

Deutsche Forschungsgemeinschaft

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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