Integrative transcriptomic analysis of tissue-specific metabolic crosstalk after myocardial infarction

Author:

Arif Muhammad1ORCID,Klevstig Martina2,Benfeitas Rui3ORCID,Doran Stephen4,Turkez Hasan5,Uhlén Mathias1,Clausen Maryam6,Wikström Johannes7,Etal Damla8,Zhang Cheng1ORCID,Levin Malin2,Mardinoglu Adil1ORCID,Boren Jan2

Affiliation:

1. Systems Biology, KTH Royal Institute of Technology, Stockholm, Sweden

2. Department of Molecular and Clinical Medicine, University of Gothenburg, Gothenburg, Sweden

3. Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

4. Centre for Host-Microbiome Interactions, King's College London, London, United Kingdom

5. Department of Medical Biology, Atatürk University, Erzurum, Turkey

6. Discovery Sciences, Innovative Medicines and Early Development Biotech unit, AstraZeneca, Mölndal, Sweden

7. Bioscience Cardiovascular, Research and Early Development, Cardiovascular, Renal and Metabolism (CVRM), AstraZeneca, Gothenburg, Sweden

8. Translational Genomics, AstraZeneca, Gothenburg, Sweden

Abstract

Myocardial infarction (MI) promotes a range of systemic effects, many of which are unknown. Here, we investigated the alterations associated with MI progression in heart and other metabolically active tissues (liver, skeletal muscle, and adipose) in a mouse model of MI (induced by ligating the left ascending coronary artery) and sham-operated mice. We performed a genome-wide transcriptomic analysis on tissue samples obtained 6- and 24-hours post MI or sham operation. By generating tissue-specific biological networks, we observed: (1) dysregulation in multiple biological processes (including immune system, mitochondrial dysfunction, fatty-acid beta-oxidation, and RNA and protein processing) across multiple tissues post MI; and (2) tissue-specific dysregulation in biological processes in liver and heart post MI. Finally, we validated our findings in two independent MI cohorts. Overall, our integrative analysis highlighted both common and specific biological responses to MI across a range of metabolically active tissues.

Funder

Knut och Alice Wallenbergs Stiftelse

Vetenskapsrådet

Hjärt-Lungfonden

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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