Zebrafish airinemes optimize their shape between ballistic and diffusive search

Author:

Park Sohyeon1,Kim Hyunjoong2ORCID,Wang Yi3ORCID,Eom Dae Seok13ORCID,Allard Jun145ORCID

Affiliation:

1. Center for Complex Biological Systems, University of California, Irvine

2. Center for Mathematical Biology, Department of Mathematics, University of Pennsylvania

3. Department of Developmental & Cell Biology, University of California, Irvine

4. Department of Physics and Astronomy, University of California, Irvine

5. Department of Mathematics, University of California, Irvine

Abstract

In addition to diffusive signals, cells in tissue also communicate via long, thin cellular protrusions, such as airinemes in zebrafish. Before establishing communication, cellular protrusions must find their target cell. Here, we demonstrate that the shapes of airinemes in zebrafish are consistent with a finite persistent random walk model. The probability of contacting the target cell is maximized for a balance between ballistic search (straight) and diffusive search (highly curved, random). We find that the curvature of airinemes in zebrafish, extracted from live-cell microscopy, is approximately the same value as the optimum in the simple persistent random walk model. We also explore the ability of the target cell to infer direction of the airineme’s source, finding that there is a theoretical trade-off between search optimality and directional information. This provides a framework to characterize the shape, and performance objectives, of non-canonical cellular protrusions in general.

Funder

National Science Foundation

National Institutes of Health

Simons Foundation

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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