Structural basis of mitochondrial translation

Author:

Aibara Shintaro1,Singh Vivek12ORCID,Modelska Angelika3,Amunts Alexey12ORCID

Affiliation:

1. Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Solna, Sweden

2. Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden

3. Laboratory of Translational Genomics, Centre for Integrative Biology, University of Trento, Trento, Italy

Abstract

Translation of mitochondrial messenger RNA (mt-mRNA) is performed by distinct mitoribosomes comprising at least 36 mitochondria-specific proteins. How these mitoribosomal proteins assist in the binding of mt-mRNA and to what extent they are involved in the translocation of transfer RNA (mt-tRNA) is unclear. To visualize the process of translation in human mitochondria, we report ~3.0 Å resolution structure of the human mitoribosome, including the L7/L12 stalk, and eight structures of its functional complexes with mt-mRNA, mt-tRNAs, recycling factor and additional trans factors. The study reveals a transacting protein module LRPPRC-SLIRP that delivers mt-mRNA to the mitoribosomal small subunit through a dedicated platform formed by the mitochondria-specific protein mS39. Mitoribosomal proteins of the large subunit mL40, mL48, and mL64 coordinate translocation of mt-tRNA. The comparison between those structures shows dynamic interactions between the mitoribosome and its ligands, suggesting a sequential mechanism of conformational changes.

Funder

Cancerfonden

Vetenskapsrådet

Ragnar Söderbergs stiftelse

Horizon 2020 Framework Programme

Knut och Alice Wallenbergs Stiftelse

Swedish Foundation for Strategic Research

EMBO

Federation of European Biochemical Societies

Horizon 2020 - Marie Sklodowska-Curie Innovative Training Network

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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